Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 NOC2LP1-202ENST00000452600 2235 ntBASIC15.79■□□□□ 0.12
CPEB3Q8NE35 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 KRT18P48-201ENST00000434763 852 ntBASIC15.79■□□□□ 0.12
CPEB3Q8NE35 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 AC113404.2-201ENST00000507884 177 ntBASIC15.79■□□□□ 0.12
CPEB3Q8NE35 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 AC018470.1-201ENST00000624790 3129 ntBASIC15.79■□□□□ 0.12
CPEB3Q8NE35 AC138028.4-201ENST00000564984 1845 ntBASIC15.79■□□□□ 0.12
CPEB3Q8NE35 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 LINC00602-201ENST00000629776 2065 ntBASIC15.79■□□□□ 0.12
CPEB3Q8NE35 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
CPEB3Q8NE35 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 LINC00167-201ENST00000530583 1419 ntBASIC15.78■□□□□ 0.12
CPEB3Q8NE35 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 AP000997.3-201ENST00000623333 2250 ntBASIC15.78■□□□□ 0.12
CPEB3Q8NE35 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 AC087388.1-201ENST00000571370 1112 ntBASIC15.78■□□□□ 0.12
CPEB3Q8NE35 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPEB3Q8NE35 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 ARMC10P1-201ENST00000313754 855 ntBASIC15.77■□□□□ 0.12
CPEB3Q8NE35 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 AP003733.1-201ENST00000491725 852 ntBASIC15.77■□□□□ 0.12
CPEB3Q8NE35 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CPEB3Q8NE35 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CPEB3Q8NE35 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms