Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC012317.2-201ENST00000623305 2251 ntBASIC18.43■□□□□ 0.54
CASC4Q6P4E1 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CASC4Q6P4E1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CASC4Q6P4E1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CASC4Q6P4E1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 NAPSB-206ENST00000562112 1266 ntBASIC18.42■□□□□ 0.54
CASC4Q6P4E1 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 LINC00896-202ENST00000609602 2128 ntBASIC18.42■□□□□ 0.54
CASC4Q6P4E1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CASC4Q6P4E1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 CYP2D8P-201ENST00000433633 1490 ntBASIC18.41■□□□□ 0.54
CASC4Q6P4E1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 TSPY15P-201ENST00000457163 923 ntBASIC18.41■□□□□ 0.54
CASC4Q6P4E1 AC010240.3-201ENST00000607688 395 ntBASIC18.41■□□□□ 0.54
CASC4Q6P4E1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 AC093010.1-201ENST00000473625 1624 ntBASIC18.41■□□□□ 0.54
CASC4Q6P4E1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CASC4Q6P4E1 KRT8P9-201ENST00000558927 1449 ntBASIC18.4■□□□□ 0.54
CASC4Q6P4E1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 MIR3180-4-201ENST00000582223 153 ntBASIC18.4■□□□□ 0.54
CASC4Q6P4E1 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 AC024243.1-201ENST00000609234 778 ntBASIC18.4■□□□□ 0.54
CASC4Q6P4E1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.4■□□□□ 0.54
CASC4Q6P4E1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CASC4Q6P4E1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CASC4Q6P4E1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.39■□□□□ 0.54
CASC4Q6P4E1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms