Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.93■□□□□ 0.94
CCDC144BQ3MJ40 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC144BQ3MJ40 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC144BQ3MJ40 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC144BQ3MJ40 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CCDC144BQ3MJ40 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC144BQ3MJ40 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC144BQ3MJ40 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
CCDC144BQ3MJ40 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC144BQ3MJ40 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC144BQ3MJ40 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC144BQ3MJ40 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC144BQ3MJ40 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC144BQ3MJ40 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC144BQ3MJ40 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 MIR3180-4-201ENST00000582223 153 ntBASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 LINC01711-201ENST00000598340 967 ntBASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 GPR32P1-201ENST00000601788 811 ntBASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 ESPNP-201ENST00000270691 2015 ntBASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCDC144BQ3MJ40 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 LINC00167-201ENST00000530583 1419 ntBASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 AL160237.2-201ENST00000556165 472 ntBASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 AC074051.2-201ENST00000565115 352 ntBASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 AC233702.3-201ENST00000578656 1387 ntBASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCDC144BQ3MJ40 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC144BQ3MJ40 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC144BQ3MJ40 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC144BQ3MJ40 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CCDC144BQ3MJ40 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC144BQ3MJ40 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC144BQ3MJ40 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC144BQ3MJ40 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC144BQ3MJ40 AC138894.3-201ENST00000603787 634 ntBASIC20.9■□□□□ 0.94
CCDC144BQ3MJ40 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC144BQ3MJ40 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC144BQ3MJ40 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CCDC144BQ3MJ40 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC144BQ3MJ40 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC144BQ3MJ40 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms