Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 DNAJB3-201ENST00000446806 729 ntBASIC22.74■■□□□ 1.23
COL15A1P39059 DHDH-204ENST00000523250 634 ntTSL 5 BASIC22.74■■□□□ 1.23
COL15A1P39059 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL15A1P39059 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
COL15A1P39059 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL15A1P39059 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
COL15A1P39059 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL15A1P39059 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL15A1P39059 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
COL15A1P39059 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL15A1P39059 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC22.73■■□□□ 1.23
COL15A1P39059 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL15A1P39059 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL15A1P39059 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL15A1P39059 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL15A1P39059 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL15A1P39059 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.73■■□□□ 1.23
COL15A1P39059 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL15A1P39059 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC22.73■■□□□ 1.23
COL15A1P39059 AC004832.2-201ENST00000426397 482 ntBASIC22.73■■□□□ 1.23
COL15A1P39059 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC22.73■■□□□ 1.23
COL15A1P39059 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL15A1P39059 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC22.73■■□□□ 1.23
COL15A1P39059 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL15A1P39059 AL139424.1-201ENST00000607572 797 ntBASIC22.73■■□□□ 1.23
COL15A1P39059 AC073592.4-201ENST00000623827 446 ntBASIC22.73■■□□□ 1.23
COL15A1P39059 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC22.73■■□□□ 1.23
COL15A1P39059 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
COL15A1P39059 AC093503.3-201ENST00000624917 2352 ntBASIC22.72■■□□□ 1.23
COL15A1P39059 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL15A1P39059 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
COL15A1P39059 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
COL15A1P39059 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL15A1P39059 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC22.72■■□□□ 1.23
COL15A1P39059 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL15A1P39059 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL15A1P39059 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL15A1P39059 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL15A1P39059 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL15A1P39059 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC22.72■■□□□ 1.23
COL15A1P39059 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL15A1P39059 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
COL15A1P39059 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC22.72■■□□□ 1.23
COL15A1P39059 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC22.72■■□□□ 1.23
COL15A1P39059 PMS2P2-201ENST00000425039 1128 ntBASIC22.72■■□□□ 1.23
COL15A1P39059 HMGN1P19-201ENST00000436976 333 ntBASIC22.72■■□□□ 1.23
COL15A1P39059 URGCP-206ENST00000446958 365 ntTSL 2 BASIC22.72■■□□□ 1.23
COL15A1P39059 AC004967.1-201ENST00000453589 447 ntBASIC22.72■■□□□ 1.23
COL15A1P39059 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL15A1P39059 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL15A1P39059 SDCCAG3P1-201ENST00000589292 1150 ntBASIC22.72■■□□□ 1.23
COL15A1P39059 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL15A1P39059 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC22.72■■□□□ 1.23
COL15A1P39059 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL15A1P39059 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL15A1P39059 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.71■■□□□ 1.23
COL15A1P39059 PMPCAP1-201ENST00000508114 1576 ntBASIC22.71■■□□□ 1.23
COL15A1P39059 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
COL15A1P39059 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC22.71■■□□□ 1.23
COL15A1P39059 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
COL15A1P39059 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL15A1P39059 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL15A1P39059 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC22.71■■□□□ 1.23
COL15A1P39059 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL15A1P39059 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC22.71■■□□□ 1.23
COL15A1P39059 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
COL15A1P39059 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC22.71■■□□□ 1.23
COL15A1P39059 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
COL15A1P39059 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL15A1P39059 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC22.71■■□□□ 1.23
COL15A1P39059 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL15A1P39059 PMP22-202ENST00000395936 816 ntTSL 3 BASIC22.71■■□□□ 1.23
COL15A1P39059 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC22.71■■□□□ 1.23
COL15A1P39059 AC112482.1-201ENST00000492080 688 ntBASIC22.71■■□□□ 1.23
COL15A1P39059 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
COL15A1P39059 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC22.71■■□□□ 1.23
COL15A1P39059 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC22.71■■□□□ 1.23
COL15A1P39059 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC22.71■■□□□ 1.23
COL15A1P39059 AL022326.1-202ENST00000641533 845 ntBASIC22.71■■□□□ 1.23
COL15A1P39059 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
COL15A1P39059 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC22.71■■□□□ 1.23
COL15A1P39059 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
COL15A1P39059 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC22.71■■□□□ 1.23
COL15A1P39059 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL15A1P39059 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC22.71■■□□□ 1.23
COL15A1P39059 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL15A1P39059 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
COL15A1P39059 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
COL15A1P39059 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL15A1P39059 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL15A1P39059 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.23
COL15A1P39059 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
COL15A1P39059 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
COL15A1P39059 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL15A1P39059 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL15A1P39059 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL15A1P39059 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL15A1P39059 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
COL15A1P39059 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL15A1P39059 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms