Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CLCN1P35523 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN1P35523 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN1P35523 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN1P35523 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN1P35523 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.55■□□□□ 0.88
CLCN1P35523 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.55■□□□□ 0.88
CLCN1P35523 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN1P35523 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN1P35523 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CLCN1P35523 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CLCN1P35523 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN1P35523 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CLCN1P35523 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CLCN1P35523 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN1P35523 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN1P35523 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN1P35523 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.55■□□□□ 0.88
CLCN1P35523 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN1P35523 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.55■□□□□ 0.88
CLCN1P35523 AL160286.2-201ENST00000567150 934 ntBASIC20.55■□□□□ 0.88
CLCN1P35523 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC20.55■□□□□ 0.88
CLCN1P35523 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.55■□□□□ 0.88
CLCN1P35523 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.55■□□□□ 0.88
CLCN1P35523 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN1P35523 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.55■□□□□ 0.88
CLCN1P35523 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN1P35523 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC20.55■□□□□ 0.88
CLCN1P35523 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.54■□□□□ 0.88
CLCN1P35523 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN1P35523 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN1P35523 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN1P35523 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN1P35523 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
CLCN1P35523 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CLCN1P35523 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.54■□□□□ 0.88
CLCN1P35523 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN1P35523 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN1P35523 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN1P35523 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN1P35523 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CLCN1P35523 RPPH1-201ENST00000516869 333 ntBASIC20.54■□□□□ 0.88
CLCN1P35523 C1QBPP2-201ENST00000528754 825 ntBASIC20.54■□□□□ 0.88
CLCN1P35523 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.54■□□□□ 0.88
CLCN1P35523 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.54■□□□□ 0.88
CLCN1P35523 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.54■□□□□ 0.88
CLCN1P35523 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN1P35523 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
CLCN1P35523 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC20.54■□□□□ 0.88
CLCN1P35523 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN1P35523 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN1P35523 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.54■□□□□ 0.88
CLCN1P35523 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC20.53■□□□□ 0.88
CLCN1P35523 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN1P35523 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN1P35523 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN1P35523 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.53■□□□□ 0.88
CLCN1P35523 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN1P35523 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN1P35523 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.53■□□□□ 0.88
CLCN1P35523 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN1P35523 AL499627.1-201ENST00000569373 2188 ntBASIC20.53■□□□□ 0.88
CLCN1P35523 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN1P35523 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN1P35523 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN1P35523 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
CLCN1P35523 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.53■□□□□ 0.88
CLCN1P35523 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN1P35523 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.53■□□□□ 0.88
CLCN1P35523 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLCN1P35523 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLCN1P35523 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCN1P35523 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCN1P35523 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
CLCN1P35523 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCN1P35523 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.52■□□□□ 0.88
CLCN1P35523 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.52■□□□□ 0.88
CLCN1P35523 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.52■□□□□ 0.88
CLCN1P35523 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.52■□□□□ 0.88
CLCN1P35523 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.52■□□□□ 0.88
CLCN1P35523 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC20.52■□□□□ 0.88
CLCN1P35523 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.52■□□□□ 0.88
CLCN1P35523 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCN1P35523 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCN1P35523 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCN1P35523 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.52■□□□□ 0.88
CLCN1P35523 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CLCN1P35523 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CLCN1P35523 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.52■□□□□ 0.87
CLCN1P35523 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CLCN1P35523 HYMAI-201ENST00000635591 3347 ntBASIC20.52■□□□□ 0.87
CLCN1P35523 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN1P35523 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN1P35523 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN1P35523 AC023824.1-201ENST00000562945 2975 ntBASIC20.51■□□□□ 0.87
CLCN1P35523 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.51■□□□□ 0.87
CLCN1P35523 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN1P35523 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.51■□□□□ 0.87
CLCN1P35523 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCN1P35523 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms