Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.03■□□□□ 0.64
CHRNA3P32297 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.03■□□□□ 0.64
CHRNA3P32297 NEK4P2-201ENST00000580004 1012 ntBASIC19.03■□□□□ 0.64
CHRNA3P32297 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA3P32297 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CHRNA3P32297 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA3P32297 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA3P32297 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA3P32297 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA3P32297 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CHRNA3P32297 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CHRNA3P32297 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.03■□□□□ 0.64
CHRNA3P32297 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA3P32297 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHRNA3P32297 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA3P32297 AC139713.2-201ENST00000641328 2723 ntBASIC19.02■□□□□ 0.64
CHRNA3P32297 AC006116.8-202ENST00000587620 1550 ntBASIC19.02■□□□□ 0.64
CHRNA3P32297 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA3P32297 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.02■□□□□ 0.64
CHRNA3P32297 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA3P32297 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA3P32297 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA3P32297 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA3P32297 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CHRNA3P32297 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.02■□□□□ 0.64
CHRNA3P32297 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA3P32297 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.02■□□□□ 0.64
CHRNA3P32297 AC092647.4-201ENST00000457211 535 ntBASIC19.02■□□□□ 0.64
CHRNA3P32297 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA3P32297 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA3P32297 AC087388.1-201ENST00000571370 1112 ntBASIC19.02■□□□□ 0.64
CHRNA3P32297 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.02■□□□□ 0.64
CHRNA3P32297 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.02■□□□□ 0.64
CHRNA3P32297 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.02■□□□□ 0.64
CHRNA3P32297 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.02■□□□□ 0.64
CHRNA3P32297 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA3P32297 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA3P32297 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA3P32297 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA3P32297 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA3P32297 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CHRNA3P32297 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.02■□□□□ 0.64
CHRNA3P32297 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHRNA3P32297 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CHRNA3P32297 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CHRNA3P32297 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CHRNA3P32297 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CHRNA3P32297 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
CHRNA3P32297 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CHRNA3P32297 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA3P32297 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA3P32297 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRNA3P32297 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA3P32297 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA3P32297 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CHRNA3P32297 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA3P32297 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CHRNA3P32297 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CHRNA3P32297 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA3P32297 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CHRNA3P32297 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.01■□□□□ 0.63
CHRNA3P32297 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRNA3P32297 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRNA3P32297 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA3P32297 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.01■□□□□ 0.63
CHRNA3P32297 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA3P32297 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CHRNA3P32297 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRNA3P32297 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA3P32297 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRNA3P32297 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA3P32297 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA3P32297 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA3P32297 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRNA3P32297 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA3P32297 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA3P32297 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CHRNA3P32297 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA3P32297 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CHRNA3P32297 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRNA3P32297 AL645608.8-201ENST00000606034 2086 ntBASIC19.01■□□□□ 0.63
CHRNA3P32297 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNA3P32297 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19■□□□□ 0.63
CHRNA3P32297 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNA3P32297 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19■□□□□ 0.63
CHRNA3P32297 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19■□□□□ 0.63
CHRNA3P32297 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19■□□□□ 0.63
CHRNA3P32297 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRNA3P32297 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19■□□□□ 0.63
CHRNA3P32297 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNA3P32297 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRNA3P32297 SDHAP2-201ENST00000455183 2001 ntBASIC19■□□□□ 0.63
CHRNA3P32297 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CHRNA3P32297 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRNA3P32297 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNA3P32297 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNA3P32297 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRNA3P32297 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19■□□□□ 0.63
CHRNA3P32297 HOMER2P1-201ENST00000455653 964 ntBASIC19■□□□□ 0.63
CHRNA3P32297 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms