Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXA11P31270 AP000867.4-201ENST00000641616 219 ntBASIC19.44■□□□□ 0.7
HOXA11P31270 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA11P31270 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA11P31270 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA11P31270 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA11P31270 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXA11P31270 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA11P31270 AC022898.2-201ENST00000616822 1312 ntBASIC19.44■□□□□ 0.7
HOXA11P31270 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
HOXA11P31270 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA11P31270 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA11P31270 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA11P31270 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA11P31270 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA11P31270 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXA11P31270 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXA11P31270 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.43■□□□□ 0.7
HOXA11P31270 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA11P31270 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXA11P31270 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA11P31270 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXA11P31270 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXA11P31270 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA11P31270 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HOXA11P31270 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA11P31270 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HOXA11P31270 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
HOXA11P31270 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA11P31270 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA11P31270 AL031284.1-201ENST00000419297 478 ntBASIC19.43■□□□□ 0.7
HOXA11P31270 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HOXA11P31270 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXA11P31270 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.43■□□□□ 0.7
HOXA11P31270 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
HOXA11P31270 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXA11P31270 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.43■□□□□ 0.7
HOXA11P31270 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXA11P31270 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXA11P31270 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXA11P31270 AC104581.1-202ENST00000635932 2618 ntBASIC19.43■□□□□ 0.7
HOXA11P31270 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXA11P31270 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA11P31270 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.43■□□□□ 0.7
HOXA11P31270 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA11P31270 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA11P31270 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA11P31270 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXA11P31270 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXA11P31270 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA11P31270 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXA11P31270 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HOXA11P31270 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXA11P31270 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA11P31270 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HOXA11P31270 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HOXA11P31270 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA11P31270 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HOXA11P31270 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA11P31270 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXA11P31270 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HOXA11P31270 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA11P31270 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA11P31270 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXA11P31270 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HOXA11P31270 HNRNPDP1-201ENST00000439535 754 ntBASIC19.42■□□□□ 0.7
HOXA11P31270 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXA11P31270 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA11P31270 SART3-203ENST00000546611 1184 ntBASIC19.42■□□□□ 0.7
HOXA11P31270 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.42■□□□□ 0.7
HOXA11P31270 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
HOXA11P31270 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA11P31270 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA11P31270 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA11P31270 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA11P31270 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA11P31270 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXA11P31270 AC090164.3-201ENST00000610780 2143 ntBASIC19.42■□□□□ 0.7
HOXA11P31270 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXA11P31270 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA11P31270 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA11P31270 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
HOXA11P31270 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA11P31270 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA11P31270 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA11P31270 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXA11P31270 AC009113.1-201ENST00000570267 2443 ntBASIC19.41■□□□□ 0.7
HOXA11P31270 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA11P31270 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA11P31270 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA11P31270 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXA11P31270 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.41■□□□□ 0.7
HOXA11P31270 AF186996.4-201ENST00000467186 377 ntBASIC19.41■□□□□ 0.7
HOXA11P31270 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXA11P31270 AC122714.2-201ENST00000502787 707 ntBASIC19.41■□□□□ 0.7
HOXA11P31270 AP001005.1-201ENST00000571755 1248 ntBASIC19.41■□□□□ 0.7
HOXA11P31270 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXA11P31270 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXA11P31270 BX640515.1-201ENST00000617215 977 ntBASIC19.41■□□□□ 0.7
HOXA11P31270 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms