Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.3□□□□□ -0.12
PF4V1P10720 LINC01711-201ENST00000598340 967 ntBASIC14.3□□□□□ -0.12
PF4V1P10720 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
PF4V1P10720 AC024563.2-201ENST00000603282 481 ntBASIC14.3□□□□□ -0.12
PF4V1P10720 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PF4V1P10720 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.3□□□□□ -0.12
PF4V1P10720 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PF4V1P10720 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
PF4V1P10720 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
PF4V1P10720 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
PF4V1P10720 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PF4V1P10720 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PF4V1P10720 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC14.3□□□□□ -0.12
PF4V1P10720 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PF4V1P10720 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.3□□□□□ -0.12
PF4V1P10720 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PF4V1P10720 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
PF4V1P10720 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.3□□□□□ -0.12
PF4V1P10720 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.3□□□□□ -0.12
PF4V1P10720 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
PF4V1P10720 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
PF4V1P10720 GMCL1P1-201ENST00000463439 1581 ntBASIC14.3□□□□□ -0.12
PF4V1P10720 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.3□□□□□ -0.12
PF4V1P10720 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.29□□□□□ -0.12
PF4V1P10720 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 SDHAP2-201ENST00000455183 2001 ntBASIC14.29□□□□□ -0.12
PF4V1P10720 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.29□□□□□ -0.12
PF4V1P10720 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.29□□□□□ -0.12
PF4V1P10720 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.29□□□□□ -0.12
PF4V1P10720 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.29□□□□□ -0.12
PF4V1P10720 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
PF4V1P10720 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.29□□□□□ -0.12
PF4V1P10720 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.29□□□□□ -0.12
PF4V1P10720 LINC00265-3P-201ENST00000447588 903 ntBASIC14.29□□□□□ -0.12
PF4V1P10720 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.29□□□□□ -0.12
PF4V1P10720 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.29□□□□□ -0.12
PF4V1P10720 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.29□□□□□ -0.12
PF4V1P10720 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
PF4V1P10720 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.29□□□□□ -0.12
PF4V1P10720 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.29□□□□□ -0.12
PF4V1P10720 AC008687.5-201ENST00000593746 558 ntBASIC14.29□□□□□ -0.12
PF4V1P10720 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.29□□□□□ -0.12
PF4V1P10720 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.29□□□□□ -0.12
PF4V1P10720 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.29□□□□□ -0.12
PF4V1P10720 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
PF4V1P10720 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 AL138781.2-201ENST00000617896 1843 ntBASIC14.29□□□□□ -0.12
PF4V1P10720 AC073592.3-201ENST00000625118 1834 ntBASIC14.29□□□□□ -0.12
PF4V1P10720 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
PF4V1P10720 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.29□□□□□ -0.12
PF4V1P10720 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
PF4V1P10720 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PF4V1P10720 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PF4V1P10720 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
PF4V1P10720 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PF4V1P10720 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PF4V1P10720 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PF4V1P10720 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PF4V1P10720 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PF4V1P10720 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PF4V1P10720 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.28□□□□□ -0.12
PF4V1P10720 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.28□□□□□ -0.12
PF4V1P10720 MIR662-201ENST00000384847 95 ntBASIC14.28□□□□□ -0.12
PF4V1P10720 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PF4V1P10720 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PF4V1P10720 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PF4V1P10720 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
PF4V1P10720 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PF4V1P10720 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PF4V1P10720 AP003733.1-201ENST00000491725 852 ntBASIC14.28□□□□□ -0.12
PF4V1P10720 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.28□□□□□ -0.12
PF4V1P10720 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
PF4V1P10720 AP000867.3-201ENST00000524675 377 ntBASIC14.28□□□□□ -0.12
PF4V1P10720 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PF4V1P10720 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PF4V1P10720 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PF4V1P10720 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PF4V1P10720 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
PF4V1P10720 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
PF4V1P10720 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PF4V1P10720 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms