Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SLC28A2O43868 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC28A2O43868 AC112777.1-201ENST00000540175 1423 ntBASIC17.4■□□□□ 0.38
SLC28A2O43868 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC28A2O43868 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC28A2O43868 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
SLC28A2O43868 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC28A2O43868 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC28A2O43868 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC28A2O43868 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC28A2O43868 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.4■□□□□ 0.38
SLC28A2O43868 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC28A2O43868 AC092597.1-201ENST00000487352 616 ntBASIC17.4■□□□□ 0.38
SLC28A2O43868 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC28A2O43868 FOSL1P1-201ENST00000511041 816 ntBASIC17.4■□□□□ 0.38
SLC28A2O43868 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.4■□□□□ 0.38
SLC28A2O43868 LINC02084-201ENST00000606069 1096 ntBASIC17.4■□□□□ 0.38
SLC28A2O43868 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC28A2O43868 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC28A2O43868 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SLC28A2O43868 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SLC28A2O43868 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC28A2O43868 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SLC28A2O43868 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC28A2O43868 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
SLC28A2O43868 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC28A2O43868 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SLC28A2O43868 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC28A2O43868 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.4■□□□□ 0.38
SLC28A2O43868 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC28A2O43868 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SLC28A2O43868 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SLC28A2O43868 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
SLC28A2O43868 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.39■□□□□ 0.38
SLC28A2O43868 ABALON-201ENST00000629058 1903 ntBASIC17.39■□□□□ 0.37
SLC28A2O43868 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC28A2O43868 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC28A2O43868 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC28A2O43868 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC28A2O43868 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC28A2O43868 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC28A2O43868 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC28A2O43868 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
SLC28A2O43868 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC28A2O43868 MIR574-201ENST00000385209 96 ntBASIC17.39■□□□□ 0.37
SLC28A2O43868 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC28A2O43868 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC28A2O43868 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC28A2O43868 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC28A2O43868 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC28A2O43868 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.39■□□□□ 0.37
SLC28A2O43868 AL121912.1-201ENST00000603683 238 ntBASIC17.39■□□□□ 0.37
SLC28A2O43868 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.39■□□□□ 0.37
SLC28A2O43868 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC28A2O43868 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC28A2O43868 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC28A2O43868 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SLC28A2O43868 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC28A2O43868 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
SLC28A2O43868 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.39■□□□□ 0.37
SLC28A2O43868 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SLC28A2O43868 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC28A2O43868 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.39■□□□□ 0.37
SLC28A2O43868 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SLC28A2O43868 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC28A2O43868 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SLC28A2O43868 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SLC28A2O43868 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC28A2O43868 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC28A2O43868 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.38■□□□□ 0.37
SLC28A2O43868 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.38■□□□□ 0.37
SLC28A2O43868 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
SLC28A2O43868 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SLC28A2O43868 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 CHCHD2P8-201ENST00000429873 447 ntBASIC17.38■□□□□ 0.37
SLC28A2O43868 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 AC034232.1-201ENST00000506026 1064 ntBASIC17.38■□□□□ 0.37
SLC28A2O43868 KRT18P31-201ENST00000506277 1292 ntBASIC17.38■□□□□ 0.37
SLC28A2O43868 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.38■□□□□ 0.37
SLC28A2O43868 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SLC28A2O43868 HLA-A-201ENST00000376802 1334 ntBASIC17.38■□□□□ 0.37
SLC28A2O43868 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SLC28A2O43868 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms