Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.71■□□□□ 0.59
MSI1O43347 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MSI1O43347 KRT17P6-201ENST00000453795 1220 ntBASIC18.71■□□□□ 0.59
MSI1O43347 AC104819.1-201ENST00000504587 486 ntBASIC18.71■□□□□ 0.59
MSI1O43347 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.71■□□□□ 0.59
MSI1O43347 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.71■□□□□ 0.59
MSI1O43347 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.71■□□□□ 0.59
MSI1O43347 PRELID1P1-202ENST00000567272 903 ntBASIC18.71■□□□□ 0.59
MSI1O43347 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.71■□□□□ 0.59
MSI1O43347 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.71■□□□□ 0.59
MSI1O43347 Z69720.1-201ENST00000601483 472 ntBASIC18.71■□□□□ 0.59
MSI1O43347 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.71■□□□□ 0.59
MSI1O43347 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSI1O43347 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
MSI1O43347 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSI1O43347 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
MSI1O43347 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.71■□□□□ 0.59
MSI1O43347 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.71■□□□□ 0.59
MSI1O43347 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
MSI1O43347 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
MSI1O43347 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
MSI1O43347 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.7■□□□□ 0.58
MSI1O43347 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.7■□□□□ 0.58
MSI1O43347 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.7■□□□□ 0.58
MSI1O43347 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
MSI1O43347 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
MSI1O43347 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
MSI1O43347 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.7■□□□□ 0.58
MSI1O43347 VENTXP7-201ENST00000475503 772 ntBASIC18.7■□□□□ 0.58
MSI1O43347 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.7■□□□□ 0.58
MSI1O43347 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.7■□□□□ 0.58
MSI1O43347 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.7■□□□□ 0.58
MSI1O43347 AC012615.1-201ENST00000565797 1299 ntBASIC18.7■□□□□ 0.58
MSI1O43347 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.7■□□□□ 0.58
MSI1O43347 AC005336.2-201ENST00000593183 939 ntBASIC18.7■□□□□ 0.58
MSI1O43347 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.7■□□□□ 0.58
MSI1O43347 AL353801.3-201ENST00000609898 542 ntBASIC18.7■□□□□ 0.58
MSI1O43347 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
MSI1O43347 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MSI1O43347 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSI1O43347 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MSI1O43347 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSI1O43347 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSI1O43347 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSI1O43347 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MSI1O43347 AP000997.3-201ENST00000623333 2250 ntBASIC18.69■□□□□ 0.58
MSI1O43347 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
MSI1O43347 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSI1O43347 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSI1O43347 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MSI1O43347 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MSI1O43347 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MSI1O43347 IGHV3-47-201ENST00000425060 335 ntBASIC18.69■□□□□ 0.58
MSI1O43347 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
MSI1O43347 AC112698.1-201ENST00000510299 916 ntBASIC18.69■□□□□ 0.58
MSI1O43347 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.69■□□□□ 0.58
MSI1O43347 AC138894.3-201ENST00000603787 634 ntBASIC18.69■□□□□ 0.58
MSI1O43347 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.69■□□□□ 0.58
MSI1O43347 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MSI1O43347 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.69■□□□□ 0.58
MSI1O43347 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSI1O43347 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MSI1O43347 NSUN5P1-202ENST00000421140 1535 ntBASIC18.69■□□□□ 0.58
MSI1O43347 NSUN5P2-203ENST00000457352 1529 ntBASIC18.69■□□□□ 0.58
MSI1O43347 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.69■□□□□ 0.58
MSI1O43347 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MSI1O43347 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MSI1O43347 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MSI1O43347 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.68■□□□□ 0.58
MSI1O43347 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms