Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PAX4O43316 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
PAX4O43316 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PAX4O43316 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PAX4O43316 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PAX4O43316 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC12.91□□□□□ -0.34
PAX4O43316 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PAX4O43316 AC009113.1-201ENST00000570267 2443 ntBASIC12.91□□□□□ -0.34
PAX4O43316 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PAX4O43316 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PAX4O43316 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PAX4O43316 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PAX4O43316 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PAX4O43316 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
PAX4O43316 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
PAX4O43316 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PAX4O43316 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
PAX4O43316 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC12.91□□□□□ -0.34
PAX4O43316 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
PAX4O43316 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC12.91□□□□□ -0.34
PAX4O43316 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PAX4O43316 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
PAX4O43316 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PAX4O43316 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.91□□□□□ -0.34
PAX4O43316 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC12.9□□□□□ -0.34
PAX4O43316 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 LTB4R2-202ENST00000528054 3092 ntBASIC12.9□□□□□ -0.34
PAX4O43316 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
PAX4O43316 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
PAX4O43316 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
PAX4O43316 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC12.9□□□□□ -0.34
PAX4O43316 ASL-204ENST00000395331 1538 ntTSL 5 BASIC12.9□□□□□ -0.34
PAX4O43316 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC12.9□□□□□ -0.34
PAX4O43316 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
PAX4O43316 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
PAX4O43316 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
PAX4O43316 AK4P3-201ENST00000418260 669 ntBASIC12.9□□□□□ -0.34
PAX4O43316 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.9□□□□□ -0.34
PAX4O43316 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.9□□□□□ -0.34
PAX4O43316 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC12.9□□□□□ -0.34
PAX4O43316 AC092647.4-201ENST00000457211 535 ntBASIC12.9□□□□□ -0.34
PAX4O43316 YBX1P2-201ENST00000489612 999 ntBASIC12.9□□□□□ -0.34
PAX4O43316 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.9□□□□□ -0.34
PAX4O43316 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC12.9□□□□□ -0.34
PAX4O43316 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC12.9□□□□□ -0.34
PAX4O43316 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 MIR3917-201ENST00000580971 93 ntBASIC12.9□□□□□ -0.34
PAX4O43316 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC12.9□□□□□ -0.34
PAX4O43316 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
PAX4O43316 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
PAX4O43316 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.9□□□□□ -0.34
PAX4O43316 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.9□□□□□ -0.34
PAX4O43316 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.9□□□□□ -0.34
PAX4O43316 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
PAX4O43316 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PAX4O43316 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
PAX4O43316 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
PAX4O43316 AC099343.3-201ENST00000605834 2503 ntBASIC12.9□□□□□ -0.34
PAX4O43316 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
PAX4O43316 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC12.9□□□□□ -0.35
PAX4O43316 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
PAX4O43316 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
PAX4O43316 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
PAX4O43316 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.89□□□□□ -0.35
PAX4O43316 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.89□□□□□ -0.35
PAX4O43316 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PAX4O43316 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PAX4O43316 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PAX4O43316 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PAX4O43316 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC12.89□□□□□ -0.35
PAX4O43316 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PAX4O43316 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PAX4O43316 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PAX4O43316 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PAX4O43316 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PAX4O43316 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC12.89□□□□□ -0.35
PAX4O43316 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
PAX4O43316 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC12.89□□□□□ -0.35
PAX4O43316 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PAX4O43316 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PAX4O43316 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms