Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 AC026471.5-201ENST00000615068 467 ntBASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RNF103-CHMP3A0A140T963 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 CA15P1-201ENST00000481698 905 ntBASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 REXO1L9P-201ENST00000604264 2108 ntBASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.41■□□□□ 0.38
RNF103-CHMP3A0A140T963 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF103-CHMP3A0A140T963 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF103-CHMP3A0A140T963 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF103-CHMP3A0A140T963 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 TNRC18P3-201ENST00000441896 2691 ntBASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 AP000593.1-201ENST00000393668 712 ntBASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 Z99916.2-201ENST00000604037 246 ntBASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF103-CHMP3A0A140T963 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms