Protein–RNA interactions for Protein: Q9HBF4

ZFYVE1, Zinc finger FYVE domain-containing protein 1, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1Q9HBF4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 BX276092.5-203ENST00000456199 560 ntBASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZFYVE1Q9HBF4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.08■□□□□ 0.49
ZFYVE1Q9HBF4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
ZFYVE1Q9HBF4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZFYVE1Q9HBF4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.08■□□□□ 0.49
ZFYVE1Q9HBF4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZFYVE1Q9HBF4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZFYVE1Q9HBF4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.08■□□□□ 0.49
ZFYVE1Q9HBF4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZFYVE1Q9HBF4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZFYVE1Q9HBF4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 AL121672.3-201ENST00000608644 468 ntBASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 HTR7P1-202ENST00000624664 4411 ntBASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.08■□□□□ 0.48
ZFYVE1Q9HBF4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 KRT18P65-201ENST00000439811 1286 ntBASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 DUTP2-201ENST00000519164 463 ntBASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 AC009154.2-201ENST00000621177 724 ntBASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.07■□□□□ 0.48
ZFYVE1Q9HBF4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZFYVE1Q9HBF4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZFYVE1Q9HBF4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ZFYVE1Q9HBF4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZFYVE1Q9HBF4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ZFYVE1Q9HBF4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.06■□□□□ 0.48
ZFYVE1Q9HBF4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZFYVE1Q9HBF4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.06■□□□□ 0.48
ZFYVE1Q9HBF4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZFYVE1Q9HBF4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZFYVE1Q9HBF4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms