Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
PIF1Q9H611 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.28■□□□□ 0.36
PIF1Q9H611 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PIF1Q9H611 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.28■□□□□ 0.36
PIF1Q9H611 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.28■□□□□ 0.36
PIF1Q9H611 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.28■□□□□ 0.36
PIF1Q9H611 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.28■□□□□ 0.36
PIF1Q9H611 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PIF1Q9H611 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
PIF1Q9H611 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PIF1Q9H611 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.27■□□□□ 0.36
PIF1Q9H611 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PIF1Q9H611 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PIF1Q9H611 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PIF1Q9H611 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PIF1Q9H611 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PIF1Q9H611 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.27■□□□□ 0.36
PIF1Q9H611 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PIF1Q9H611 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PIF1Q9H611 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PIF1Q9H611 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
PIF1Q9H611 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.27■□□□□ 0.36
PIF1Q9H611 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.27■□□□□ 0.36
PIF1Q9H611 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.27■□□□□ 0.36
PIF1Q9H611 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.27■□□□□ 0.36
PIF1Q9H611 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
PIF1Q9H611 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PIF1Q9H611 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PIF1Q9H611 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PIF1Q9H611 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PIF1Q9H611 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.27■□□□□ 0.36
PIF1Q9H611 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PIF1Q9H611 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.27■□□□□ 0.36
PIF1Q9H611 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.27■□□□□ 0.36
PIF1Q9H611 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PIF1Q9H611 AP000593.1-201ENST00000393668 712 ntBASIC17.27■□□□□ 0.36
PIF1Q9H611 AC012618.2-201ENST00000428058 849 ntBASIC17.27■□□□□ 0.36
PIF1Q9H611 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PIF1Q9H611 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PIF1Q9H611 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PIF1Q9H611 B3GAT3P1-201ENST00000471720 806 ntBASIC17.27■□□□□ 0.36
PIF1Q9H611 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.27■□□□□ 0.36
PIF1Q9H611 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PIF1Q9H611 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.27■□□□□ 0.36
PIF1Q9H611 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.27■□□□□ 0.36
PIF1Q9H611 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.27■□□□□ 0.36
PIF1Q9H611 AP006294.2-201ENST00000641667 209 ntBASIC17.27■□□□□ 0.36
PIF1Q9H611 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
PIF1Q9H611 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PIF1Q9H611 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PIF1Q9H611 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.27■□□□□ 0.36
PIF1Q9H611 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PIF1Q9H611 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PIF1Q9H611 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.27■□□□□ 0.35
PIF1Q9H611 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
PIF1Q9H611 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PIF1Q9H611 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PIF1Q9H611 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PIF1Q9H611 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PIF1Q9H611 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PIF1Q9H611 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PIF1Q9H611 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PIF1Q9H611 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PIF1Q9H611 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PIF1Q9H611 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PIF1Q9H611 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.26■□□□□ 0.35
PIF1Q9H611 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.26■□□□□ 0.35
PIF1Q9H611 AC084018.2-201ENST00000613093 2607 ntBASIC17.26■□□□□ 0.35
PIF1Q9H611 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PIF1Q9H611 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.26■□□□□ 0.35
PIF1Q9H611 AC034236.2-201ENST00000606662 1610 ntBASIC17.26■□□□□ 0.35
PIF1Q9H611 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PIF1Q9H611 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PIF1Q9H611 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PIF1Q9H611 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PIF1Q9H611 AL158047.1-201ENST00000445918 881 ntBASIC17.26■□□□□ 0.35
PIF1Q9H611 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms