Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 LTB4R2-202ENST00000528054 3092 ntBASIC16.76■□□□□ 0.27
UBQLN3Q9H347 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
UBQLN3Q9H347 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 MIR662-201ENST00000384847 95 ntBASIC16.75■□□□□ 0.27
UBQLN3Q9H347 AL645929.1-201ENST00000420084 975 ntBASIC16.75■□□□□ 0.27
UBQLN3Q9H347 UPK3BP1-201ENST00000428678 509 ntBASIC16.75■□□□□ 0.27
UBQLN3Q9H347 AC009065.1-201ENST00000564055 1225 ntBASIC16.75■□□□□ 0.27
UBQLN3Q9H347 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 AC138028.4-201ENST00000564984 1845 ntBASIC16.75■□□□□ 0.27
UBQLN3Q9H347 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UBQLN3Q9H347 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 AL163051.1-201ENST00000569214 1512 ntBASIC16.74■□□□□ 0.27
UBQLN3Q9H347 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UBQLN3Q9H347 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 REXO1L9P-201ENST00000604264 2108 ntBASIC16.73■□□□□ 0.27
UBQLN3Q9H347 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
UBQLN3Q9H347 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms