Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 UNC93B2-201ENST00000285383 730 ntBASIC10.79□□□□□ -0.68
LIMD2Q9BT23 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 AC116562.2-201ENST00000507042 360 ntBASIC10.79□□□□□ -0.68
LIMD2Q9BT23 AC097488.1-201ENST00000507834 756 ntBASIC10.79□□□□□ -0.68
LIMD2Q9BT23 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 AC026471.5-201ENST00000615068 467 ntBASIC10.79□□□□□ -0.68
LIMD2Q9BT23 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 AC068587.9-201ENST00000641814 219 ntBASIC10.79□□□□□ -0.68
LIMD2Q9BT23 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 AC084018.2-201ENST00000613093 2607 ntBASIC10.79□□□□□ -0.68
LIMD2Q9BT23 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LIMD2Q9BT23 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 AL365209.1-201ENST00000624418 6473 ntBASIC10.78□□□□□ -0.68
LIMD2Q9BT23 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 SNCG-201ENST00000348795 684 ntTSL 2 BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 MDFI-202ENST00000373050 809 ntTSL 2 BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 CCR12P-201ENST00000446203 998 ntBASIC10.78□□□□□ -0.68
LIMD2Q9BT23 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 AC098590.1-201ENST00000468126 897 ntBASIC10.78□□□□□ -0.68
LIMD2Q9BT23 PENK-204ENST00000518770 863 ntTSL 2 BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 AL109659.2-201ENST00000606809 1674 ntBASIC10.78□□□□□ -0.68
LIMD2Q9BT23 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LIMD2Q9BT23 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms