Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXRED1Q96CU9 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 FAM197Y1-201ENST00000421178 764 ntBASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 AL355355.2-201ENST00000442321 338 ntBASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 CA15P1-201ENST00000481698 905 ntBASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 AC096733.2-201ENST00000609937 1394 ntBASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
FOXRED1Q96CU9 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 AL645608.8-201ENST00000606034 2086 ntBASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 AC026471.5-201ENST00000615068 467 ntBASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
FOXRED1Q96CU9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 HOXB1-202ENST00000577092 1414 ntBASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
FOXRED1Q96CU9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms