Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.51■□□□□ 0.71
TRIM43Q96BQ3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 KRT8P47-201ENST00000604727 1398 ntBASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 AC096633.1-201ENST00000422446 749 ntBASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 AC073592.5-201ENST00000624854 528 ntBASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRIM43Q96BQ3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 HLA-J-203ENST00000494367 1087 ntBASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 AC008667.4-201ENST00000607370 168 ntBASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 AC093512.1-201ENST00000617969 520 ntBASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.49■□□□□ 0.71
TRIM43Q96BQ3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 RPS15P9-201ENST00000494093 319 ntBASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 PDPK2P-202ENST00000562415 1191 ntBASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRIM43Q96BQ3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.47■□□□□ 0.71
TRIM43Q96BQ3 PAWRP1-201ENST00000451083 565 ntBASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms