Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 MYC-208ENST00000641036 567 ntBASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 AC108860.2-201ENST00000562760 2183 ntBASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ATRIPQ8WXE1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 HMGA1P5-201ENST00000412453 271 ntBASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 AC091390.4-202ENST00000476426 537 ntBASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
ATRIPQ8WXE1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
ATRIPQ8WXE1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
ATRIPQ8WXE1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
ATRIPQ8WXE1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
ATRIPQ8WXE1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
ATRIPQ8WXE1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
ATRIPQ8WXE1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 MESTP1-201ENST00000404287 994 ntBASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 AL450487.1-201ENST00000426799 995 ntBASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 FAM207BP-201ENST00000447172 505 ntBASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 KRT8P3-201ENST00000519669 1449 ntBASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 AC012317.2-201ENST00000623305 2251 ntBASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ATRIPQ8WXE1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 TSPY5P-201ENST00000426936 936 ntBASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 B3GAT3P1-201ENST00000471720 806 ntBASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 AL445675.2-201ENST00000620291 557 ntBASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ATRIPQ8WXE1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms