Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 AC020916.1-201ENST00000587762 1774 ntBASIC18.3■□□□□ 0.52
PTCD2Q8WV60 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PTCD2Q8WV60 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 HCG11-201ENST00000411553 5696 ntBASIC18.29■□□□□ 0.52
PTCD2Q8WV60 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 UPK3BP1-201ENST00000428678 509 ntBASIC18.29■□□□□ 0.52
PTCD2Q8WV60 PVRIG2P-201ENST00000435460 978 ntBASIC18.29■□□□□ 0.52
PTCD2Q8WV60 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 DUTP2-201ENST00000519164 463 ntBASIC18.29■□□□□ 0.52
PTCD2Q8WV60 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 AL136038.3-201ENST00000561909 1096 ntBASIC18.29■□□□□ 0.52
PTCD2Q8WV60 AC010326.4-201ENST00000604665 891 ntBASIC18.29■□□□□ 0.52
PTCD2Q8WV60 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 AC116407.4-201ENST00000623319 1061 ntBASIC18.29■□□□□ 0.52
PTCD2Q8WV60 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 IER3-202ENST00000376377 1350 ntBASIC18.29■□□□□ 0.52
PTCD2Q8WV60 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.29■□□□□ 0.52
PTCD2Q8WV60 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 KRT18P55-202ENST00000578578 1546 ntBASIC18.28■□□□□ 0.52
PTCD2Q8WV60 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 AC034232.1-201ENST00000506026 1064 ntBASIC18.28■□□□□ 0.52
PTCD2Q8WV60 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 AL390728.6-201ENST00000566446 1246 ntBASIC18.28■□□□□ 0.52
PTCD2Q8WV60 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.28■□□□□ 0.52
PTCD2Q8WV60 AC091076.1-201ENST00000610741 619 ntBASIC18.28■□□□□ 0.52
PTCD2Q8WV60 AP000550.4-202ENST00000639755 178 ntBASIC18.28■□□□□ 0.52
PTCD2Q8WV60 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PTCD2Q8WV60 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms