Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 AC011270.2-201ENST00000624293 2550 ntBASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SIMC1Q8NDZ2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 PVRIG2P-201ENST00000435460 978 ntBASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 HYMAI.1-201ENST00000620949 238 ntBASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 AC009053.2-201ENST00000563701 2365 ntBASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 AL391807.1-203ENST00000604392 2365 ntBASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SIMC1Q8NDZ2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 AC124067.4-201ENST00000519691 2379 ntBASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 AC112907.2-201ENST00000448639 330 ntBASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 AC022616.7-201ENST00000525383 220 ntBASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SIMC1Q8NDZ2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SIMC1Q8NDZ2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SIMC1Q8NDZ2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SIMC1Q8NDZ2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SIMC1Q8NDZ2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
SIMC1Q8NDZ2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SIMC1Q8NDZ2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.02■□□□□ 0.31
SIMC1Q8NDZ2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SIMC1Q8NDZ2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SIMC1Q8NDZ2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SIMC1Q8NDZ2 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SIMC1Q8NDZ2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SIMC1Q8NDZ2 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
SIMC1Q8NDZ2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SIMC1Q8NDZ2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SIMC1Q8NDZ2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SIMC1Q8NDZ2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms