Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TTC9CQ8N5M4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 STARP1-201ENST00000397973 869 ntBASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 TK2-213ENST00000563369 882 ntTSL 5 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.29□□□□□ -0.12
TTC9CQ8N5M4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 RNF152P1-201ENST00000397754 604 ntBASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 AC117947.1-201ENST00000427448 529 ntBASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 AC113404.2-201ENST00000507884 177 ntBASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 DUTP2-201ENST00000519164 463 ntBASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 AC008764.6-201ENST00000595909 2069 ntBASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 KRT89P-201ENST00000620027 1478 ntBASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
TTC9CQ8N5M4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms