Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 AC096733.2-201ENST00000609937 1394 ntBASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM53Q6P2H8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TMEM53Q6P2H8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TMEM53Q6P2H8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TMEM53Q6P2H8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.58■□□□□ 0.25
TMEM53Q6P2H8 AL645608.8-201ENST00000606034 2086 ntBASIC16.58■□□□□ 0.25
TMEM53Q6P2H8 AL161938.1-201ENST00000569833 2180 ntBASIC16.58■□□□□ 0.25
TMEM53Q6P2H8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TMEM53Q6P2H8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
TMEM53Q6P2H8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TMEM53Q6P2H8 PCDHA1-201ENST00000378133 2726 ntBASIC16.58■□□□□ 0.25
TMEM53Q6P2H8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.58■□□□□ 0.25
TMEM53Q6P2H8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 AL596275.1-201ENST00000423464 877 ntBASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 AL355075.4-201ENST00000554988 638 ntBASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM53Q6P2H8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 ABALON-201ENST00000629058 1903 ntBASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 AP005242.2-201ENST00000580065 1175 ntBASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM53Q6P2H8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM53Q6P2H8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms