Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC9.79□□□□□ -0.84
UBR4Q5T4S7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 KRT18P32-201ENST00000424695 1287 ntBASIC9.78□□□□□ -0.84
UBR4Q5T4S7 AC026954.1-201ENST00000429771 1293 ntBASIC9.78□□□□□ -0.84
UBR4Q5T4S7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 AC016629.1-201ENST00000596579 586 ntBASIC9.78□□□□□ -0.84
UBR4Q5T4S7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 AC100757.3-201ENST00000622361 1406 ntBASIC9.78□□□□□ -0.84
UBR4Q5T4S7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 AL158211.3-201ENST00000607385 239 ntBASIC9.78□□□□□ -0.84
UBR4Q5T4S7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 RPL17P11-201ENST00000417593 544 ntBASIC9.78□□□□□ -0.84
UBR4Q5T4S7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 PTK2-225ENST00000520892 571 ntTSL 4 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 AC243960.2-201ENST00000600996 747 ntBASIC9.78□□□□□ -0.84
UBR4Q5T4S7 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 BID-203ENST00000399765 1879 ntTSL 2 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC9.78□□□□□ -0.84
UBR4Q5T4S7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
UBR4Q5T4S7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
UBR4Q5T4S7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
UBR4Q5T4S7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
UBR4Q5T4S7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC9.77□□□□□ -0.84
UBR4Q5T4S7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
UBR4Q5T4S7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
UBR4Q5T4S7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC9.77□□□□□ -0.84
UBR4Q5T4S7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 AL355306.1-201ENST00000415580 579 ntBASIC9.77□□□□□ -0.85
UBR4Q5T4S7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 AL512638.1-201ENST00000457493 794 ntBASIC9.77□□□□□ -0.85
UBR4Q5T4S7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 WWC2-AS2-201ENST00000578387 2183 ntBASIC9.77□□□□□ -0.85
UBR4Q5T4S7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
UBR4Q5T4S7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 EMC4-209ENST00000559421 497 ntTSL 2 BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 AP001527.2-201ENST00000614441 631 ntBASIC9.76□□□□□ -0.85
UBR4Q5T4S7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
UBR4Q5T4S7 AL592309.1-201ENST00000443127 649 ntBASIC9.76□□□□□ -0.85
UBR4Q5T4S7 AC112191.1-201ENST00000523689 701 ntBASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms