Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNTNAP1P78357 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CNTNAP1P78357 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.4■■□□□ 1.02
CNTNAP1P78357 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC21.4■■□□□ 1.02
CNTNAP1P78357 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC21.4■■□□□ 1.02
CNTNAP1P78357 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC21.4■■□□□ 1.02
CNTNAP1P78357 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.4■■□□□ 1.02
CNTNAP1P78357 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CNTNAP1P78357 NKAPP1-205ENST00000585790 367 ntBASIC21.4■■□□□ 1.02
CNTNAP1P78357 AL078644.1-201ENST00000609881 752 ntBASIC21.4■■□□□ 1.02
CNTNAP1P78357 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.4■■□□□ 1.02
CNTNAP1P78357 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.4■■□□□ 1.02
CNTNAP1P78357 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CNTNAP1P78357 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.4■■□□□ 1.02
CNTNAP1P78357 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNTNAP1P78357 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
CNTNAP1P78357 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.4■■□□□ 1.02
CNTNAP1P78357 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CNTNAP1P78357 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.02
CNTNAP1P78357 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
CNTNAP1P78357 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.39■■□□□ 1.02
CNTNAP1P78357 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CNTNAP1P78357 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.39■■□□□ 1.02
CNTNAP1P78357 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC21.39■■□□□ 1.02
CNTNAP1P78357 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC21.39■■□□□ 1.02
CNTNAP1P78357 AC108751.1-201ENST00000490852 363 ntBASIC21.39■■□□□ 1.02
CNTNAP1P78357 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CNTNAP1P78357 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CNTNAP1P78357 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.39■■□□□ 1.02
CNTNAP1P78357 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC21.39■■□□□ 1.02
CNTNAP1P78357 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.39■■□□□ 1.02
CNTNAP1P78357 AC092865.6-201ENST00000642101 219 ntBASIC21.39■■□□□ 1.02
CNTNAP1P78357 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNTNAP1P78357 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
CNTNAP1P78357 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.39■■□□□ 1.01
CNTNAP1P78357 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNTNAP1P78357 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNTNAP1P78357 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CNTNAP1P78357 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNTNAP1P78357 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.39■■□□□ 1.01
CNTNAP1P78357 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.39■■□□□ 1.01
CNTNAP1P78357 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNTNAP1P78357 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CNTNAP1P78357 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP1P78357 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.38■■□□□ 1.01
CNTNAP1P78357 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.38■■□□□ 1.01
CNTNAP1P78357 AL139400.1-201ENST00000366220 510 ntBASIC21.38■■□□□ 1.01
CNTNAP1P78357 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP1P78357 AC015922.1-201ENST00000421102 1152 ntBASIC21.38■■□□□ 1.01
CNTNAP1P78357 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC21.38■■□□□ 1.01
CNTNAP1P78357 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.38■■□□□ 1.01
CNTNAP1P78357 CYGB-205ENST00000590175 830 ntTSL 3 BASIC21.38■■□□□ 1.01
CNTNAP1P78357 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP1P78357 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP1P78357 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP1P78357 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
CNTNAP1P78357 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CNTNAP1P78357 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP1P78357 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP1P78357 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.38■■□□□ 1.01
CNTNAP1P78357 AC116562.4-201ENST00000641316 2276 ntBASIC21.38■■□□□ 1.01
CNTNAP1P78357 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP1P78357 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP1P78357 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.38■■□□□ 1.01
CNTNAP1P78357 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP1P78357 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP1P78357 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CNTNAP1P78357 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.38■■□□□ 1.01
CNTNAP1P78357 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP1P78357 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP1P78357 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP1P78357 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.37■■□□□ 1.01
CNTNAP1P78357 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP1P78357 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP1P78357 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CNTNAP1P78357 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC21.37■■□□□ 1.01
CNTNAP1P78357 CEND1P1-201ENST00000451006 455 ntBASIC21.37■■□□□ 1.01
CNTNAP1P78357 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CNTNAP1P78357 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.37■■□□□ 1.01
CNTNAP1P78357 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.37■■□□□ 1.01
CNTNAP1P78357 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.37■■□□□ 1.01
CNTNAP1P78357 RPL28-205ENST00000558131 444 ntTSL 5 BASIC21.37■■□□□ 1.01
CNTNAP1P78357 INO80C-206ENST00000586489 594 ntTSL 3 BASIC21.37■■□□□ 1.01
CNTNAP1P78357 AC012645.4-201ENST00000610691 1061 ntBASIC21.37■■□□□ 1.01
CNTNAP1P78357 AL513190.1-201ENST00000621254 727 ntBASIC21.37■■□□□ 1.01
CNTNAP1P78357 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.37■■□□□ 1.01
CNTNAP1P78357 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CNTNAP1P78357 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP1P78357 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.37■■□□□ 1.01
CNTNAP1P78357 AC097374.2-201ENST00000618617 1306 ntBASIC21.37■■□□□ 1.01
CNTNAP1P78357 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
CNTNAP1P78357 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP1P78357 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP1P78357 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CNTNAP1P78357 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP1P78357 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CNTNAP1P78357 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP1P78357 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CNTNAP1P78357 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CNTNAP1P78357 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms