Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.7■□□□□ 0.42
CLCNKAP51800 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.7■□□□□ 0.42
CLCNKAP51800 AC135776.1-201ENST00000319817 2481 ntBASIC17.7■□□□□ 0.42
CLCNKAP51800 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.7■□□□□ 0.42
CLCNKAP51800 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCNKAP51800 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCNKAP51800 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCNKAP51800 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCNKAP51800 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CLCNKAP51800 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCNKAP51800 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCNKAP51800 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCNKAP51800 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCNKAP51800 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCNKAP51800 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCNKAP51800 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCNKAP51800 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCNKAP51800 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCNKAP51800 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCNKAP51800 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
CLCNKAP51800 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCNKAP51800 KRT17P6-201ENST00000453795 1220 ntBASIC17.69■□□□□ 0.42
CLCNKAP51800 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CLCNKAP51800 AC104819.1-201ENST00000504587 486 ntBASIC17.69■□□□□ 0.42
CLCNKAP51800 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.69■□□□□ 0.42
CLCNKAP51800 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCNKAP51800 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.69■□□□□ 0.42
CLCNKAP51800 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCNKAP51800 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCNKAP51800 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCNKAP51800 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCNKAP51800 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCNKAP51800 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCNKAP51800 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CLCNKAP51800 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CLCNKAP51800 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCNKAP51800 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCNKAP51800 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCNKAP51800 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCNKAP51800 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCNKAP51800 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCNKAP51800 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CLCNKAP51800 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCNKAP51800 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCNKAP51800 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CLCNKAP51800 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCNKAP51800 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCNKAP51800 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCNKAP51800 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCNKAP51800 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CLCNKAP51800 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCNKAP51800 AL450487.1-201ENST00000426799 995 ntBASIC17.68■□□□□ 0.42
CLCNKAP51800 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CLCNKAP51800 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCNKAP51800 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCNKAP51800 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.68■□□□□ 0.42
CLCNKAP51800 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.68■□□□□ 0.42
CLCNKAP51800 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.68■□□□□ 0.42
CLCNKAP51800 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCNKAP51800 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCNKAP51800 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCNKAP51800 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCNKAP51800 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
CLCNKAP51800 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCNKAP51800 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCNKAP51800 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 AC093677.2-201ENST00000600169 1863 ntBASIC17.67■□□□□ 0.42
CLCNKAP51800 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CLCNKAP51800 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.67■□□□□ 0.42
CLCNKAP51800 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCNKAP51800 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.67■□□□□ 0.42
CLCNKAP51800 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.67■□□□□ 0.42
CLCNKAP51800 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.67■□□□□ 0.42
CLCNKAP51800 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCNKAP51800 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCNKAP51800 PRELID1P1-202ENST00000567272 903 ntBASIC17.67■□□□□ 0.42
CLCNKAP51800 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.67■□□□□ 0.42
CLCNKAP51800 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CLCNKAP51800 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms