Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.89■□□□□ 0.77
RFC5P40937 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.89■□□□□ 0.77
RFC5P40937 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.89■□□□□ 0.77
RFC5P40937 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.89■□□□□ 0.77
RFC5P40937 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFC5P40937 AC009533.2-201ENST00000543664 586 ntBASIC19.89■□□□□ 0.77
RFC5P40937 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RFC5P40937 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RFC5P40937 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.89■□□□□ 0.77
RFC5P40937 LINC01711-201ENST00000598340 967 ntBASIC19.89■□□□□ 0.77
RFC5P40937 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RFC5P40937 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RFC5P40937 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RFC5P40937 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.88■□□□□ 0.77
RFC5P40937 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC5P40937 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RFC5P40937 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC5P40937 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.88■□□□□ 0.77
RFC5P40937 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.88■□□□□ 0.77
RFC5P40937 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RFC5P40937 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC5P40937 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFC5P40937 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC5P40937 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.88■□□□□ 0.77
RFC5P40937 NUS1P2-201ENST00000417358 873 ntBASIC19.88■□□□□ 0.77
RFC5P40937 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.88■□□□□ 0.77
RFC5P40937 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC5P40937 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.88■□□□□ 0.77
RFC5P40937 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.88■□□□□ 0.77
RFC5P40937 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.88■□□□□ 0.77
RFC5P40937 AC096582.2-201ENST00000510860 516 ntBASIC19.88■□□□□ 0.77
RFC5P40937 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.88■□□□□ 0.77
RFC5P40937 IFNL4P1-201ENST00000607083 540 ntBASIC19.88■□□□□ 0.77
RFC5P40937 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RFC5P40937 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.88■□□□□ 0.77
RFC5P40937 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.88■□□□□ 0.77
RFC5P40937 AC114341.1-201ENST00000618070 349 ntBASIC19.88■□□□□ 0.77
RFC5P40937 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.88■□□□□ 0.77
RFC5P40937 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.88■□□□□ 0.77
RFC5P40937 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC5P40937 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
RFC5P40937 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFC5P40937 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFC5P40937 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC5P40937 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RFC5P40937 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RFC5P40937 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RFC5P40937 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RFC5P40937 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC5P40937 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.87■□□□□ 0.77
RFC5P40937 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC5P40937 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC5P40937 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC5P40937 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
RFC5P40937 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC5P40937 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RFC5P40937 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC5P40937 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFC5P40937 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC5P40937 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC5P40937 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.87■□□□□ 0.77
RFC5P40937 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.87■□□□□ 0.77
RFC5P40937 TPM4P1-201ENST00000436100 807 ntBASIC19.87■□□□□ 0.77
RFC5P40937 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.87■□□□□ 0.77
RFC5P40937 UNC93B7-201ENST00000509439 705 ntBASIC19.87■□□□□ 0.77
RFC5P40937 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC5P40937 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.87■□□□□ 0.77
RFC5P40937 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.87■□□□□ 0.77
RFC5P40937 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC5P40937 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.87■□□□□ 0.77
RFC5P40937 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC5P40937 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC5P40937 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
RFC5P40937 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC5P40937 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RFC5P40937 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RFC5P40937 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.86■□□□□ 0.77
RFC5P40937 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
RFC5P40937 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC5P40937 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC5P40937 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFC5P40937 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.86■□□□□ 0.77
RFC5P40937 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC5P40937 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFC5P40937 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFC5P40937 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC5P40937 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC5P40937 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.86■□□□□ 0.77
RFC5P40937 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RFC5P40937 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.86■□□□□ 0.77
RFC5P40937 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.86■□□□□ 0.77
RFC5P40937 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.86■□□□□ 0.77
RFC5P40937 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.86■□□□□ 0.77
RFC5P40937 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.86■□□□□ 0.77
RFC5P40937 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.86■□□□□ 0.77
RFC5P40937 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.86■□□□□ 0.77
RFC5P40937 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFC5P40937 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RFC5P40937 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFC5P40937 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms