Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC22.93■■□□□ 1.26
ATP6V1AP38606 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.93■■□□□ 1.26
ATP6V1AP38606 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC22.93■■□□□ 1.26
ATP6V1AP38606 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ATP6V1AP38606 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ATP6V1AP38606 ETFA-208ENST00000559602 792 ntTSL 3 BASIC22.93■■□□□ 1.26
ATP6V1AP38606 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC22.93■■□□□ 1.26
ATP6V1AP38606 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.93■■□□□ 1.26
ATP6V1AP38606 AL596442.2-201ENST00000610240 980 ntBASIC22.93■■□□□ 1.26
ATP6V1AP38606 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC22.93■■□□□ 1.26
ATP6V1AP38606 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC22.93■■□□□ 1.26
ATP6V1AP38606 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.93■■□□□ 1.26
ATP6V1AP38606 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ATP6V1AP38606 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
ATP6V1AP38606 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC22.93■■□□□ 1.26
ATP6V1AP38606 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ATP6V1AP38606 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ATP6V1AP38606 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ATP6V1AP38606 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
ATP6V1AP38606 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
ATP6V1AP38606 AC010460.3-201ENST00000511359 1579 ntBASIC22.93■■□□□ 1.26
ATP6V1AP38606 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC22.93■■□□□ 1.26
ATP6V1AP38606 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ATP6V1AP38606 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ATP6V1AP38606 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ATP6V1AP38606 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.92■■□□□ 1.26
ATP6V1AP38606 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22.92■■□□□ 1.26
ATP6V1AP38606 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ATP6V1AP38606 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ATP6V1AP38606 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC22.92■■□□□ 1.26
ATP6V1AP38606 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ATP6V1AP38606 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
ATP6V1AP38606 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
ATP6V1AP38606 AP006288.1-201ENST00000446065 395 ntBASIC22.92■■□□□ 1.26
ATP6V1AP38606 PRYP5-201ENST00000451909 266 ntBASIC22.92■■□□□ 1.26
ATP6V1AP38606 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ATP6V1AP38606 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
ATP6V1AP38606 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC22.92■■□□□ 1.26
ATP6V1AP38606 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ATP6V1AP38606 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
ATP6V1AP38606 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.92■■□□□ 1.26
ATP6V1AP38606 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC22.92■■□□□ 1.26
ATP6V1AP38606 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.92■■□□□ 1.26
ATP6V1AP38606 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
ATP6V1AP38606 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC22.92■■□□□ 1.26
ATP6V1AP38606 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC22.92■■□□□ 1.26
ATP6V1AP38606 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.92■■□□□ 1.26
ATP6V1AP38606 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ATP6V1AP38606 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
ATP6V1AP38606 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.91■■□□□ 1.26
ATP6V1AP38606 AC005332.7-201ENST00000614046 2005 ntBASIC22.91■■□□□ 1.26
ATP6V1AP38606 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ATP6V1AP38606 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
ATP6V1AP38606 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ATP6V1AP38606 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
ATP6V1AP38606 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
ATP6V1AP38606 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
ATP6V1AP38606 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC22.91■■□□□ 1.26
ATP6V1AP38606 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC22.91■■□□□ 1.26
ATP6V1AP38606 AC136632.2-201ENST00000512891 861 ntBASIC22.91■■□□□ 1.26
ATP6V1AP38606 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ATP6V1AP38606 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC22.91■■□□□ 1.26
ATP6V1AP38606 COX5A-206ENST00000568783 571 ntTSL 3 BASIC22.91■■□□□ 1.26
ATP6V1AP38606 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC22.91■■□□□ 1.26
ATP6V1AP38606 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ATP6V1AP38606 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC22.91■■□□□ 1.26
ATP6V1AP38606 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ATP6V1AP38606 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.91■■□□□ 1.26
ATP6V1AP38606 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
ATP6V1AP38606 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ATP6V1AP38606 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ATP6V1AP38606 MED29-202ENST00000594368 1471 ntTSL 2 BASIC22.91■■□□□ 1.26
ATP6V1AP38606 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
ATP6V1AP38606 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
ATP6V1AP38606 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC22.91■■□□□ 1.26
ATP6V1AP38606 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
ATP6V1AP38606 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
ATP6V1AP38606 KRT18P28-201ENST00000453838 1332 ntBASIC22.9■■□□□ 1.26
ATP6V1AP38606 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
ATP6V1AP38606 AC096633.1-201ENST00000422446 749 ntBASIC22.9■■□□□ 1.26
ATP6V1AP38606 MCCD1P2-201ENST00000423228 335 ntBASIC22.9■■□□□ 1.26
ATP6V1AP38606 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC22.9■■□□□ 1.26
ATP6V1AP38606 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC22.9■■□□□ 1.26
ATP6V1AP38606 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC22.9■■□□□ 1.26
ATP6V1AP38606 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC22.9■■□□□ 1.26
ATP6V1AP38606 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC22.9■■□□□ 1.26
ATP6V1AP38606 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC22.9■■□□□ 1.26
ATP6V1AP38606 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC22.9■■□□□ 1.26
ATP6V1AP38606 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
ATP6V1AP38606 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
ATP6V1AP38606 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC22.9■■□□□ 1.26
ATP6V1AP38606 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC22.9■■□□□ 1.26
ATP6V1AP38606 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.9■■□□□ 1.26
ATP6V1AP38606 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
ATP6V1AP38606 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.89■■□□□ 1.26
ATP6V1AP38606 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.26
ATP6V1AP38606 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC22.89■■□□□ 1.26
ATP6V1AP38606 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.26
ATP6V1AP38606 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
ATP6V1AP38606 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms