Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTAP01374 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTAP01374 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.63□□□□□ -0.23
LTAP01374 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LTAP01374 GPAT2P1-201ENST00000444924 1672 ntBASIC13.63□□□□□ -0.23
LTAP01374 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LTAP01374 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LTAP01374 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.62□□□□□ -0.23
LTAP01374 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC13.62□□□□□ -0.23
LTAP01374 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LTAP01374 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.62□□□□□ -0.23
LTAP01374 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.62□□□□□ -0.23
LTAP01374 KRASP1-201ENST00000407852 552 ntBASIC13.62□□□□□ -0.23
LTAP01374 KRT17P3-201ENST00000420566 1262 ntBASIC13.62□□□□□ -0.23
LTAP01374 KSR1P1-201ENST00000446298 240 ntBASIC13.62□□□□□ -0.23
LTAP01374 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC13.62□□□□□ -0.23
LTAP01374 AC008403.3-201ENST00000598924 454 ntBASIC13.62□□□□□ -0.23
LTAP01374 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LTAP01374 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.62□□□□□ -0.23
LTAP01374 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.62□□□□□ -0.23
LTAP01374 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
LTAP01374 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LTAP01374 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.62□□□□□ -0.23
LTAP01374 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LTAP01374 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LTAP01374 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.61□□□□□ -0.23
LTAP01374 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.61□□□□□ -0.23
LTAP01374 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LTAP01374 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 LINC01126-201ENST00000623515 1646 ntBASIC13.61□□□□□ -0.23
LTAP01374 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.61□□□□□ -0.23
LTAP01374 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.61□□□□□ -0.23
LTAP01374 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 AC069152.1-201ENST00000438030 544 ntBASIC13.61□□□□□ -0.23
LTAP01374 DUTP2-201ENST00000519164 463 ntBASIC13.61□□□□□ -0.23
LTAP01374 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.61□□□□□ -0.23
LTAP01374 AL023875.1-201ENST00000640777 796 ntBASIC13.61□□□□□ -0.23
LTAP01374 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.61□□□□□ -0.23
LTAP01374 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LTAP01374 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LTAP01374 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LTAP01374 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LTAP01374 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
LTAP01374 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LTAP01374 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LTAP01374 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTAP01374 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC13.6□□□□□ -0.23
LTAP01374 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LTAP01374 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTAP01374 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LTAP01374 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.6□□□□□ -0.23
LTAP01374 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LTAP01374 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.6□□□□□ -0.23
LTAP01374 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LTAP01374 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTAP01374 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.6□□□□□ -0.23
LTAP01374 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTAP01374 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LTAP01374 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LTAP01374 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms