Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SNCGO76070 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNCGO76070 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNCGO76070 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNCGO76070 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNCGO76070 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.19□□□□□ -0.46
SNCGO76070 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNCGO76070 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNCGO76070 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SNCGO76070 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNCGO76070 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNCGO76070 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.19□□□□□ -0.46
SNCGO76070 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SNCGO76070 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SNCGO76070 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNCGO76070 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SNCGO76070 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNCGO76070 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
SNCGO76070 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SNCGO76070 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SNCGO76070 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNCGO76070 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.18□□□□□ -0.46
SNCGO76070 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNCGO76070 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC12.18□□□□□ -0.46
SNCGO76070 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC12.18□□□□□ -0.46
SNCGO76070 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.18□□□□□ -0.46
SNCGO76070 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
SNCGO76070 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNCGO76070 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.18□□□□□ -0.46
SNCGO76070 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SNCGO76070 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SNCGO76070 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SNCGO76070 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
SNCGO76070 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNCGO76070 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC12.18□□□□□ -0.46
SNCGO76070 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
SNCGO76070 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SNCGO76070 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNCGO76070 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.18□□□□□ -0.46
SNCGO76070 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SNCGO76070 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC12.18□□□□□ -0.46
SNCGO76070 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SNCGO76070 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.18□□□□□ -0.46
SNCGO76070 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNCGO76070 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SNCGO76070 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNCGO76070 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC12.18□□□□□ -0.46
SNCGO76070 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC12.18□□□□□ -0.46
SNCGO76070 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SNCGO76070 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SNCGO76070 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNCGO76070 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SNCGO76070 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SNCGO76070 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNCGO76070 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNCGO76070 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.18□□□□□ -0.46
SNCGO76070 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
SNCGO76070 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SNCGO76070 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.18□□□□□ -0.46
SNCGO76070 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SNCGO76070 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
SNCGO76070 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.17□□□□□ -0.46
SNCGO76070 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC12.17□□□□□ -0.46
SNCGO76070 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC12.17□□□□□ -0.46
SNCGO76070 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
SNCGO76070 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
SNCGO76070 SLC25A6P5-201ENST00000435663 894 ntBASIC12.17□□□□□ -0.46
SNCGO76070 SERP1-208ENST00000491660 830 ntTSL 2 BASIC12.17□□□□□ -0.46
SNCGO76070 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC12.17□□□□□ -0.46
SNCGO76070 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SNCGO76070 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
SNCGO76070 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.17□□□□□ -0.46
SNCGO76070 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.17□□□□□ -0.46
SNCGO76070 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
SNCGO76070 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms