Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 AC112777.1-201ENST00000540175 1423 ntBASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 MTDHP2-201ENST00000601468 714 ntBASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 AC132872.4-202ENST00000622924 2756 ntBASIC12.07□□□□□ -0.48
TRBV20-1A0A075B6N2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 SAPCD2P1-201ENST00000395413 1184 ntBASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 AC006449.5-201ENST00000610658 2098 ntBASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRBV20-1A0A075B6N2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC12.05□□□□□ -0.48
TRBV20-1A0A075B6N2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC12.05□□□□□ -0.48
TRBV20-1A0A075B6N2 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRBV20-1A0A075B6N2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
TRBV20-1A0A075B6N2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC12.05□□□□□ -0.48
TRBV20-1A0A075B6N2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRBV20-1A0A075B6N2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRBV20-1A0A075B6N2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
TRBV20-1A0A075B6N2 AC093010.1-201ENST00000473625 1624 ntBASIC12.05□□□□□ -0.48
TRBV20-1A0A075B6N2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRBV20-1A0A075B6N2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC12.05□□□□□ -0.48
TRBV20-1A0A075B6N2 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRBV20-1A0A075B6N2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRBV20-1A0A075B6N2 AC097381.1-201ENST00000429019 1296 ntBASIC12.05□□□□□ -0.48
TRBV20-1A0A075B6N2 YBX1P1-201ENST00000445822 960 ntBASIC12.05□□□□□ -0.48
TRBV20-1A0A075B6N2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC12.05□□□□□ -0.48
TRBV20-1A0A075B6N2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
TRBV20-1A0A075B6N2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC12.05□□□□□ -0.48
TRBV20-1A0A075B6N2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
TRBV20-1A0A075B6N2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms