Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 AC105129.2-201ENST00000559536 390 ntBASIC7.35□□□□□ -1.23
MACF1Q9UPN3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 AC015967.2-201ENST00000624092 234 ntBASIC7.35□□□□□ -1.23
MACF1Q9UPN3 AC006435.4-201ENST00000625037 234 ntBASIC7.35□□□□□ -1.23
MACF1Q9UPN3 AL356737.1-201ENST00000634391 234 ntBASIC7.35□□□□□ -1.23
MACF1Q9UPN3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 AC100757.3-201ENST00000622361 1406 ntBASIC7.35□□□□□ -1.23
MACF1Q9UPN3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 IGF1-203ENST00000392904 761 ntTSL 5 BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC7.35□□□□□ -1.23
MACF1Q9UPN3 AC133552.6-201ENST00000613406 534 ntBASIC7.35□□□□□ -1.23
MACF1Q9UPN3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 SPDYE11-202ENST00000450699 704 ntBASIC7.34□□□□□ -1.23
MACF1Q9UPN3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 SPDYE9P-201ENST00000570642 692 ntBASIC7.34□□□□□ -1.23
MACF1Q9UPN3 MIR4706-201ENST00000582134 82 ntBASIC7.34□□□□□ -1.23
MACF1Q9UPN3 SPDYE10P-202ENST00000612005 668 ntBASIC7.34□□□□□ -1.23
MACF1Q9UPN3 SPDYE8P-202ENST00000612377 668 ntBASIC7.34□□□□□ -1.23
MACF1Q9UPN3 AC004790.2-201ENST00000623588 572 ntBASIC7.34□□□□□ -1.23
MACF1Q9UPN3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 RPL17P11-201ENST00000417593 544 ntBASIC7.34□□□□□ -1.23
MACF1Q9UPN3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 AC104794.3-201ENST00000566840 1248 ntBASIC7.34□□□□□ -1.23
MACF1Q9UPN3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 AC092580.3-201ENST00000430932 139 ntBASIC7.34□□□□□ -1.23
MACF1Q9UPN3 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 WNT11-204ENST00000621122 789 ntTSL 5 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC7.34□□□□□ -1.23
MACF1Q9UPN3 AC148477.9-201ENST00000623974 539 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms