Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 HYI-206ENST00000372434 1025 ntTSL 5 BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 KRT18P11-201ENST00000435214 1283 ntBASIC14.68□□□□□ -0.06
NKX6-2Q9C056 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NKX6-2Q9C056 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 AL603756.1-201ENST00000606511 2163 ntBASIC14.67□□□□□ -0.06
NKX6-2Q9C056 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX6-2Q9C056 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 AC105917.1-201ENST00000506637 2539 ntBASIC14.66□□□□□ -0.06
NKX6-2Q9C056 TCAF2P1-201ENST00000291129 2421 ntBASIC14.66□□□□□ -0.06
NKX6-2Q9C056 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX6-2Q9C056 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms