Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NR1H4Q96RI1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.06■□□□□ 0.32
NR1H4Q96RI1 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.06■□□□□ 0.32
NR1H4Q96RI1 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NR1H4Q96RI1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 AC016405.3-201ENST00000607710 860 ntBASIC17.05■□□□□ 0.32
NR1H4Q96RI1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 AL355312.1-201ENST00000407115 2176 ntBASIC17.05■□□□□ 0.32
NR1H4Q96RI1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NR1H4Q96RI1 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.04■□□□□ 0.32
NR1H4Q96RI1 KRT18P11-201ENST00000435214 1283 ntBASIC17.04■□□□□ 0.32
NR1H4Q96RI1 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 AC013268.1-206ENST00000638368 961 ntBASIC17.04■□□□□ 0.32
NR1H4Q96RI1 AC112229.1-201ENST00000639295 961 ntBASIC17.04■□□□□ 0.32
NR1H4Q96RI1 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 AC022188.1-201ENST00000620960 1664 ntBASIC17.04■□□□□ 0.32
NR1H4Q96RI1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NR1H4Q96RI1 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 AC005052.1-201ENST00000625181 2492 ntBASIC17.03■□□□□ 0.32
NR1H4Q96RI1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 AC100791.3-201ENST00000617619 330 ntBASIC17.03■□□□□ 0.32
NR1H4Q96RI1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NR1H4Q96RI1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms