Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RITA1Q96K30 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.53□□□□□ -0.08
RITA1Q96K30 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.53□□□□□ -0.08
RITA1Q96K30 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RITA1Q96K30 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 LINC00167-201ENST00000530583 1419 ntBASIC14.53□□□□□ -0.08
RITA1Q96K30 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.53□□□□□ -0.08
RITA1Q96K30 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC14.53□□□□□ -0.08
RITA1Q96K30 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.53□□□□□ -0.08
RITA1Q96K30 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.53□□□□□ -0.08
RITA1Q96K30 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.53□□□□□ -0.08
RITA1Q96K30 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.53□□□□□ -0.08
RITA1Q96K30 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.53□□□□□ -0.08
RITA1Q96K30 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.53□□□□□ -0.08
RITA1Q96K30 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RITA1Q96K30 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.53□□□□□ -0.08
RITA1Q96K30 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.53□□□□□ -0.08
RITA1Q96K30 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.53□□□□□ -0.08
RITA1Q96K30 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC14.53□□□□□ -0.08
RITA1Q96K30 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RITA1Q96K30 AC134043.2-201ENST00000624206 2238 ntBASIC14.53□□□□□ -0.08
RITA1Q96K30 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RITA1Q96K30 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RITA1Q96K30 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RITA1Q96K30 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.53□□□□□ -0.08
RITA1Q96K30 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RITA1Q96K30 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RITA1Q96K30 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RITA1Q96K30 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RITA1Q96K30 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RITA1Q96K30 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RITA1Q96K30 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RITA1Q96K30 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RITA1Q96K30 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RITA1Q96K30 LINC01311-201ENST00000565162 1445 ntBASIC14.52□□□□□ -0.08
RITA1Q96K30 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RITA1Q96K30 AC012317.2-201ENST00000623305 2251 ntBASIC14.52□□□□□ -0.08
RITA1Q96K30 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RITA1Q96K30 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RITA1Q96K30 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RITA1Q96K30 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RITA1Q96K30 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RITA1Q96K30 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RITA1Q96K30 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RITA1Q96K30 FAM8A6P-201ENST00000407496 1135 ntBASIC14.52□□□□□ -0.09
RITA1Q96K30 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
RITA1Q96K30 SPDYE13P-201ENST00000445314 798 ntBASIC14.52□□□□□ -0.09
RITA1Q96K30 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RITA1Q96K30 VENTXP5-201ENST00000523979 775 ntBASIC14.52□□□□□ -0.09
RITA1Q96K30 AC022616.7-201ENST00000525383 220 ntBASIC14.52□□□□□ -0.09
RITA1Q96K30 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.52□□□□□ -0.09
RITA1Q96K30 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
RITA1Q96K30 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.52□□□□□ -0.09
RITA1Q96K30 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
RITA1Q96K30 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RITA1Q96K30 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC14.52□□□□□ -0.09
RITA1Q96K30 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RITA1Q96K30 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.52□□□□□ -0.09
RITA1Q96K30 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
RITA1Q96K30 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RITA1Q96K30 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
RITA1Q96K30 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RITA1Q96K30 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RITA1Q96K30 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RITA1Q96K30 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RITA1Q96K30 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RITA1Q96K30 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RITA1Q96K30 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
RITA1Q96K30 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RITA1Q96K30 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RITA1Q96K30 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RITA1Q96K30 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
RITA1Q96K30 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RITA1Q96K30 AC100803.2-201ENST00000562459 1963 ntBASIC14.51□□□□□ -0.09
RITA1Q96K30 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.51□□□□□ -0.09
RITA1Q96K30 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RITA1Q96K30 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms