Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 BICD1-207ENST00000551848 1962 ntBASIC17.94■□□□□ 0.46
SCAMP4Q969E2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 KRT18P65-201ENST00000439811 1286 ntBASIC17.94■□□□□ 0.46
SCAMP4Q969E2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 AP000867.3-201ENST00000524675 377 ntBASIC17.94■□□□□ 0.46
SCAMP4Q969E2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.94■□□□□ 0.46
SCAMP4Q969E2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SCAMP4Q969E2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 AP005901.3-202ENST00000581653 237 ntBASIC17.93■□□□□ 0.46
SCAMP4Q969E2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.93■□□□□ 0.46
SCAMP4Q969E2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SCAMP4Q969E2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 AC233702.3-201ENST00000578656 1387 ntBASIC17.92■□□□□ 0.46
SCAMP4Q969E2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 MTCL1P1-201ENST00000446207 792 ntBASIC17.92■□□□□ 0.46
SCAMP4Q969E2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 AC011840.4-201ENST00000578471 627 ntBASIC17.92■□□□□ 0.46
SCAMP4Q969E2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.92■□□□□ 0.46
SCAMP4Q969E2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms