Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TM9SF4Q92544 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.1■□□□□ 0.33
TM9SF4Q92544 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TM9SF4Q92544 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM9SF4Q92544 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.09■□□□□ 0.33
TM9SF4Q92544 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.09■□□□□ 0.33
TM9SF4Q92544 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM9SF4Q92544 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM9SF4Q92544 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.09■□□□□ 0.33
TM9SF4Q92544 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
TM9SF4Q92544 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM9SF4Q92544 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM9SF4Q92544 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM9SF4Q92544 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM9SF4Q92544 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM9SF4Q92544 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.09■□□□□ 0.33
TM9SF4Q92544 DRAXINP1-201ENST00000437611 948 ntBASIC17.09■□□□□ 0.33
TM9SF4Q92544 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TM9SF4Q92544 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.09■□□□□ 0.33
TM9SF4Q92544 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.09■□□□□ 0.33
TM9SF4Q92544 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.09■□□□□ 0.33
TM9SF4Q92544 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.09■□□□□ 0.33
TM9SF4Q92544 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.09■□□□□ 0.33
TM9SF4Q92544 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.09■□□□□ 0.33
TM9SF4Q92544 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.09■□□□□ 0.33
TM9SF4Q92544 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TM9SF4Q92544 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM9SF4Q92544 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM9SF4Q92544 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM9SF4Q92544 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
TM9SF4Q92544 AC067852.2-201ENST00000590513 2313 ntBASIC17.09■□□□□ 0.33
TM9SF4Q92544 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM9SF4Q92544 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TM9SF4Q92544 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TM9SF4Q92544 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TM9SF4Q92544 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TM9SF4Q92544 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TM9SF4Q92544 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
TM9SF4Q92544 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.08■□□□□ 0.33
TM9SF4Q92544 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TM9SF4Q92544 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
TM9SF4Q92544 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.08■□□□□ 0.33
TM9SF4Q92544 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.08■□□□□ 0.33
TM9SF4Q92544 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
TM9SF4Q92544 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TM9SF4Q92544 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
TM9SF4Q92544 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TM9SF4Q92544 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TM9SF4Q92544 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TM9SF4Q92544 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.08■□□□□ 0.33
TM9SF4Q92544 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.08■□□□□ 0.32
TM9SF4Q92544 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM9SF4Q92544 AC034236.2-201ENST00000606662 1610 ntBASIC17.08■□□□□ 0.32
TM9SF4Q92544 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TM9SF4Q92544 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM9SF4Q92544 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TM9SF4Q92544 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.08■□□□□ 0.32
TM9SF4Q92544 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM9SF4Q92544 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TM9SF4Q92544 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TM9SF4Q92544 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM9SF4Q92544 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM9SF4Q92544 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM9SF4Q92544 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM9SF4Q92544 AL845331.1-201ENST00000424978 1190 ntBASIC17.08■□□□□ 0.32
TM9SF4Q92544 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.08■□□□□ 0.32
TM9SF4Q92544 LINC00265-3P-201ENST00000447588 903 ntBASIC17.08■□□□□ 0.32
TM9SF4Q92544 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TM9SF4Q92544 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM9SF4Q92544 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.08■□□□□ 0.32
TM9SF4Q92544 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM9SF4Q92544 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TM9SF4Q92544 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM9SF4Q92544 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM9SF4Q92544 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.08■□□□□ 0.32
TM9SF4Q92544 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM9SF4Q92544 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TM9SF4Q92544 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TM9SF4Q92544 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TM9SF4Q92544 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.07■□□□□ 0.32
TM9SF4Q92544 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
TM9SF4Q92544 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TM9SF4Q92544 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TM9SF4Q92544 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TM9SF4Q92544 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.07■□□□□ 0.32
TM9SF4Q92544 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
TM9SF4Q92544 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TM9SF4Q92544 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TM9SF4Q92544 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TM9SF4Q92544 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TM9SF4Q92544 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TM9SF4Q92544 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TM9SF4Q92544 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TM9SF4Q92544 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TM9SF4Q92544 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms