Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 ZNF574-201ENST00000222339 3309 ntTSL 3 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SVIPQ8NHG7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 ADCY4-201ENST00000310677 3415 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 TM9SF2-201ENST00000376387 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 AC102953.2-201ENST00000609755 3026 ntBASIC11.28□□□□□ -0.6
SVIPQ8NHG7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 LRTOMT-222ENST00000615940 1895 ntTSL 5 BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 PPP2R1A-205ENST00000462990 2730 ntTSL 2 BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 BCL6-202ENST00000406870 3569 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 BEND3P1-201ENST00000421591 1944 ntBASIC11.28□□□□□ -0.6
SVIPQ8NHG7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 ACVRL1-206ENST00000550683 4121 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 ARHGAP25-202ENST00000409202 2945 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 AC138969.2-201ENST00000532739 9932 ntBASIC11.28□□□□□ -0.6
SVIPQ8NHG7 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 WEE2-AS1-206ENST00000478332 2259 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC11.28□□□□□ -0.6
SVIPQ8NHG7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
SVIPQ8NHG7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SVIPQ8NHG7 AP001993.1-201ENST00000527317 2337 ntTSL 2 BASIC11.27□□□□□ -0.6
SVIPQ8NHG7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC11.27□□□□□ -0.6
SVIPQ8NHG7 SLC25A5-AS1-203ENST00000446986 1874 ntTSL 2 BASIC11.27□□□□□ -0.6
SVIPQ8NHG7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
SVIPQ8NHG7 UBTFL8-201ENST00000426903 2112 ntBASIC11.27□□□□□ -0.6
SVIPQ8NHG7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SVIPQ8NHG7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC11.27□□□□□ -0.6
SVIPQ8NHG7 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC11.27□□□□□ -0.6
SVIPQ8NHG7 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC11.27□□□□□ -0.6
SVIPQ8NHG7 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SVIPQ8NHG7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11.27□□□□□ -0.6
SVIPQ8NHG7 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 AL035422.2-201ENST00000603059 565 ntBASIC11.27□□□□□ -0.61
SVIPQ8NHG7 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 ACVR1-203ENST00000410057 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 AC006504.5-208ENST00000588784 2401 ntBASIC11.27□□□□□ -0.61
SVIPQ8NHG7 PRPH2-201ENST00000230381 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 AC008764.8-201ENST00000623966 2717 ntBASIC11.27□□□□□ -0.61
SVIPQ8NHG7 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 TMEM105-201ENST00000332900 3321 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SVIPQ8NHG7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms