RNA–Protein interactions for RNA: ENST00000615940.4

LRTOMT-222, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5 BASIC

Gene LRTOMT, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-222ENST00000615940 NISCHQ9Y2I1 1504 aa20.14■□□□□ 0.81
LRTOMT-222ENST00000615940 SLC24A1O60721 1099 aa18.31■□□□□ 0.52
LRTOMT-222ENST00000615940 MYT1Q01538 1121 aa17.9■□□□□ 0.46
LRTOMT-222ENST00000615940 CCDC180Q9P1Z9 1646 aa17.83■□□□□ 0.44
LRTOMT-222ENST00000615940 PELP1Q8IZL8 1130 aaKnown RBP17.7■□□□□ 0.42
LRTOMT-222ENST00000615940 TTBK1Q5TCY1 1321 aaPredicted RBP17.65■□□□□ 0.42
LRTOMT-222ENST00000615940 ABCC9O60706 1549 aa17.28■□□□□ 0.36
LRTOMT-222ENST00000615940 DAXXQ9UER7 740 aaPredicted RBP17.12■□□□□ 0.33
LRTOMT-222ENST00000615940 APLP2Q06481 763 aa16.98■□□□□ 0.31
LRTOMT-222ENST00000615940 ERICH6Q7L0X2 663 aa16.97■□□□□ 0.31
LRTOMT-222ENST00000615940 PRKCSHP14314 528 aaPredicted RBP16.93■□□□□ 0.3
LRTOMT-222ENST00000615940 ZCCHC6Q5VYS8 1495 aaKnown RBP16.82■□□□□ 0.28
LRTOMT-222ENST00000615940 DCAF8L2P0C7V8 631 aa16.8■□□□□ 0.28
LRTOMT-222ENST00000615940 NACADO15069 1562 aa16.66■□□□□ 0.26
LRTOMT-222ENST00000615940 RB1CC1Q8TDY2 1594 aa16.65■□□□□ 0.26
LRTOMT-222ENST00000615940 DCAF1Q9Y4B6 1507 aa16.61■□□□□ 0.25
LRTOMT-222ENST00000615940 MYO15BQ96JP2 1530 aa16.57■□□□□ 0.24
LRTOMT-222ENST00000615940 UNC13AQ9UPW8 1703 aa16.47■□□□□ 0.23
LRTOMT-222ENST00000615940 SCRIBQ14160 1630 aa16.35■□□□□ 0.21
LRTOMT-222ENST00000615940 NCBP3Q53F19 620 aaKnown RBP16.33■□□□□ 0.2
LRTOMT-222ENST00000615940 BICRAQ9NZM4 1560 aa16.21■□□□□ 0.18
LRTOMT-222ENST00000615940 PABPN1Q86U42 306 aaKnown RBP eCLIP16.18■□□□□ 0.18
LRTOMT-222ENST00000615940 SHROOM4Q9ULL8 1493 aa16.14■□□□□ 0.17
LRTOMT-222ENST00000615940 EHMT2Q96KQ7 1210 aa15.98■□□□□ 0.15
LRTOMT-222ENST00000615940 ARXQ96QS3 562 aa15.93■□□□□ 0.14
LRTOMT-222ENST00000615940 RTN4Q9NQC3 1192 aaKnown RBP15.92■□□□□ 0.14
LRTOMT-222ENST00000615940 EIF5BO60841 1220 aaKnown RBP15.91■□□□□ 0.14
LRTOMT-222ENST00000615940 PLPPR3Q6T4P5 718 aa15.87■□□□□ 0.13
LRTOMT-222ENST00000615940 EIF4G1Q04637 1599 aaKnown RBP15.74■□□□□ 0.11
LRTOMT-222ENST00000615940 CECR2Q9BXF3 1484 aa15.72■□□□□ 0.11
LRTOMT-222ENST00000615940 RANGAP1P46060 587 aaPredicted RBP15.69■□□□□ 0.1
LRTOMT-222ENST00000615940 BCL11AQ9H165 835 aa15.69■□□□□ 0.1
LRTOMT-222ENST00000615940 DNAJC5BQ9UF47 199 aa15.69■□□□□ 0.1
LRTOMT-222ENST00000615940 CC2D2AQ9P2K1 1620 aa15.65■□□□□ 0.1
LRTOMT-222ENST00000615940 SMARCA4P51532 1647 aa15.62■□□□□ 0.09
LRTOMT-222ENST00000615940 AMER1Q5JTC6 1135 aaPredicted RBP15.61■□□□□ 0.09
LRTOMT-222ENST00000615940 BAZ1AQ9NRL2 1556 aaPredicted RBP15.58■□□□□ 0.08
LRTOMT-222ENST00000615940 MROH2BQ7Z745 1585 aa15.57■□□□□ 0.08
LRTOMT-222ENST00000615940 TIMELESSQ9UNS1 1208 aa15.48■□□□□ 0.07
LRTOMT-222ENST00000615940 WIZO95785 1651 aa15.47■□□□□ 0.07
LRTOMT-222ENST00000615940 ATAD2BQ9ULI0 1458 aa15.44■□□□□ 0.06
LRTOMT-222ENST00000615940 RSF1Q96T23 1441 aaPredicted RBP15.42■□□□□ 0.06
LRTOMT-222ENST00000615940 SMARCA2P51531 1590 aa15.41■□□□□ 0.06
LRTOMT-222ENST00000615940 PEG3Q9GZU2 1588 aa15.41■□□□□ 0.06
LRTOMT-222ENST00000615940 NCAPD3P42695 1498 aa15.36■□□□□ 0.05
LRTOMT-222ENST00000615940 HOMEZQ8IX15 550 aa15.34■□□□□ 0.05
LRTOMT-222ENST00000615940 FAM9AQ8IZU1 332 aaPredicted RBP15.33■□□□□ 0.05
LRTOMT-222ENST00000615940 BAZ1BQ9UIG0 1483 aaKnown RBP15.33■□□□□ 0.04
LRTOMT-222ENST00000615940 HMGXB3Q12766 1538 aa15.33■□□□□ 0.04
LRTOMT-222ENST00000615940 KLHL34Q8N239 644 aa15.3■□□□□ 0.04
LRTOMT-222ENST00000615940 SUPT5HO00267 1087 aaKnown RBP15.25■□□□□ 0.03
LRTOMT-222ENST00000615940 PLEKHG5O94827 1062 aa15.24■□□□□ 0.03
LRTOMT-222ENST00000615940 TOP2AP11388 1531 aaKnown RBP15.22■□□□□ 0.03
LRTOMT-222ENST00000615940 TULP1O00294 542 aaPredicted RBP15.21■□□□□ 0.03
LRTOMT-222ENST00000615940 PODXL2Q9NZ53 605 aa15.06■□□□□ 0
LRTOMT-222ENST00000615940 CCDC88BA6NC98 1476 aa15.05■□□□□ 0
LRTOMT-222ENST00000615940 NESP48681 1621 aa15.05■□□□□ -0
LRTOMT-222ENST00000615940 TAOK2Q9UL54 1235 aa15.02■□□□□ -0
LRTOMT-222ENST00000615940 KCNA4P22459 653 aa15.01□□□□□ -0.01
LRTOMT-222ENST00000615940 UBE2Q2Q8WVN8 375 aa14.96□□□□□ -0.01
LRTOMT-222ENST00000615940 LAMC3Q9Y6N6 1575 aa14.96□□□□□ -0.02
LRTOMT-222ENST00000615940 CHIC1Q5VXU3 224 aa14.94□□□□□ -0.02
LRTOMT-222ENST00000615940 PRDM2Q13029 1718 aa14.93□□□□□ -0.02
LRTOMT-222ENST00000615940 CADPSQ9ULU8 1353 aa14.93□□□□□ -0.02
LRTOMT-222ENST00000615940 KIF21AQ7Z4S6 1674 aa14.92□□□□□ -0.02
LRTOMT-222ENST00000615940 CFTRP13569 1480 aa14.9□□□□□ -0.02
LRTOMT-222ENST00000615940 ERCC6Q03468 1493 aa14.84□□□□□ -0.03
LRTOMT-222ENST00000615940 NPM2Q86SE8 214 aaKnown RBP14.81□□□□□ -0.04
LRTOMT-222ENST00000615940 PDS5BQ9NTI5 1447 aa14.81□□□□□ -0.04
LRTOMT-222ENST00000615940 FANCD2Q9BXW9 1451 aa14.79□□□□□ -0.04
LRTOMT-222ENST00000615940 BCANQ96GW7 911 aa14.79□□□□□ -0.04
LRTOMT-222ENST00000615940 CENPBP07199 599 aaPredicted RBP14.78□□□□□ -0.04
LRTOMT-222ENST00000615940 CEP164Q9UPV0 1460 aa14.75□□□□□ -0.05
LRTOMT-222ENST00000615940 THOC2Q8NI27 1593 aaKnown RBP14.75□□□□□ -0.05
LRTOMT-222ENST00000615940 PDIA4P13667 645 aaKnown RBP14.74□□□□□ -0.05
LRTOMT-222ENST00000615940 CSRNP3Q8WYN3 585 aa14.73□□□□□ -0.05
LRTOMT-222ENST00000615940 TPRNQ4KMQ1 711 aa14.72□□□□□ -0.05
LRTOMT-222ENST00000615940 GTF3C3Q9Y5Q9 886 aa14.69□□□□□ -0.06
LRTOMT-222ENST00000615940 MRC2Q9UBG0 1479 aa14.68□□□□□ -0.06
LRTOMT-222ENST00000615940 URB2Q14146 1524 aaKnown RBP14.67□□□□□ -0.06
LRTOMT-222ENST00000615940 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
LRTOMT-222ENST00000615940 FBXO3Q9UK99 471 aa14.65□□□□□ -0.06
LRTOMT-222ENST00000615940 ABCC8Q09428 1581 aa14.65□□□□□ -0.06
LRTOMT-222ENST00000615940 WDR62O43379 1518 aa14.63□□□□□ -0.07
LRTOMT-222ENST00000615940 C14orf37Q86TY3 774 aa14.6□□□□□ -0.07
LRTOMT-222ENST00000615940 TOPBP1Q92547 1522 aa14.59□□□□□ -0.07
LRTOMT-222ENST00000615940 DNMBPQ6XZF7 1577 aa14.59□□□□□ -0.07
LRTOMT-222ENST00000615940 CUX1P39880 1505 aa14.59□□□□□ -0.07
LRTOMT-222ENST00000615940 NEFLP07196 543 aa14.59□□□□□ -0.07
LRTOMT-222ENST00000615940 PKNOX2Q96KN3 472 aa14.58□□□□□ -0.08
LRTOMT-222ENST00000615940 HRCP23327 699 aa14.57□□□□□ -0.08
LRTOMT-222ENST00000615940 CUX2O14529 1486 aa14.55□□□□□ -0.08
LRTOMT-222ENST00000615940 SYNJ1O43426 1573 aa14.55□□□□□ -0.08
LRTOMT-222ENST00000615940 PDE4CQ08493 712 aa14.53□□□□□ -0.08
LRTOMT-222ENST00000615940 WRNQ14191 1432 aaPredicted RBP eCLIP14.53□□□□□ -0.08
LRTOMT-222ENST00000615940 BIVM-ERCC5R4GMW8 1640 aa14.52□□□□□ -0.09
LRTOMT-222ENST00000615940 TOP2BQ02880 1626 aa14.5□□□□□ -0.09
LRTOMT-222ENST00000615940 POLA1P09884 1462 aaPredicted RBP14.49□□□□□ -0.09
LRTOMT-222ENST00000615940 FGD5Q6ZNL6 1462 aa14.49□□□□□ -0.09
LRTOMT-222ENST00000615940 RAD54L2Q9Y4B4 1467 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms