Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 AC141257.4-201ENST00000634557 245 ntBASIC16.49■□□□□ 0.23
NIPAL3Q6P499 AC136944.6-201ENST00000634818 245 ntBASIC16.49■□□□□ 0.23
NIPAL3Q6P499 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.49■□□□□ 0.23
NIPAL3Q6P499 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NIPAL3Q6P499 PHGDH-209ENST00000641074 1780 ntBASIC16.49■□□□□ 0.23
NIPAL3Q6P499 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 AC005521.1-201ENST00000393351 872 ntBASIC16.48■□□□□ 0.23
NIPAL3Q6P499 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 AC112497.1-201ENST00000624824 639 ntBASIC16.48■□□□□ 0.23
NIPAL3Q6P499 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NIPAL3Q6P499 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 KRT8P50-201ENST00000562022 1438 ntBASIC16.47■□□□□ 0.23
NIPAL3Q6P499 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 TERF1P1-201ENST00000311003 1181 ntBASIC16.47■□□□□ 0.23
NIPAL3Q6P499 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.47■□□□□ 0.23
NIPAL3Q6P499 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NIPAL3Q6P499 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms