Protein–RNA interactions for Protein: Q07002

CDK18, Cyclin-dependent kinase 18, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18Q07002 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDK18Q07002 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.41■□□□□ 0.54
CDK18Q07002 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CDK18Q07002 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK18Q07002 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.41■□□□□ 0.54
CDK18Q07002 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK18Q07002 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK18Q07002 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK18Q07002 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.41■□□□□ 0.54
CDK18Q07002 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK18Q07002 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.41■□□□□ 0.54
CDK18Q07002 FAM8A6P-201ENST00000407496 1135 ntBASIC18.41■□□□□ 0.54
CDK18Q07002 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDK18Q07002 AC022616.7-201ENST00000525383 220 ntBASIC18.41■□□□□ 0.54
CDK18Q07002 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.41■□□□□ 0.54
CDK18Q07002 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.41■□□□□ 0.54
CDK18Q07002 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.41■□□□□ 0.54
CDK18Q07002 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDK18Q07002 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK18Q07002 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDK18Q07002 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.41■□□□□ 0.54
CDK18Q07002 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDK18Q07002 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDK18Q07002 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDK18Q07002 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDK18Q07002 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.41■□□□□ 0.54
CDK18Q07002 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDK18Q07002 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK18Q07002 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK18Q07002 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDK18Q07002 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.4■□□□□ 0.54
CDK18Q07002 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK18Q07002 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDK18Q07002 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.4■□□□□ 0.54
CDK18Q07002 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.4■□□□□ 0.54
CDK18Q07002 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK18Q07002 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK18Q07002 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.4■□□□□ 0.54
CDK18Q07002 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.4■□□□□ 0.54
CDK18Q07002 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.4■□□□□ 0.54
CDK18Q07002 AC092597.1-201ENST00000487352 616 ntBASIC18.4■□□□□ 0.54
CDK18Q07002 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.4■□□□□ 0.54
CDK18Q07002 LINC01238-205ENST00000567549 1107 ntBASIC18.4■□□□□ 0.54
CDK18Q07002 AC008687.5-201ENST00000593746 558 ntBASIC18.4■□□□□ 0.54
CDK18Q07002 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK18Q07002 AL096828.2-201ENST00000567259 1965 ntBASIC18.4■□□□□ 0.54
CDK18Q07002 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK18Q07002 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK18Q07002 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.4■□□□□ 0.54
CDK18Q07002 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
CDK18Q07002 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
CDK18Q07002 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK18Q07002 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK18Q07002 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK18Q07002 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK18Q07002 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDK18Q07002 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK18Q07002 AC138028.4-201ENST00000564984 1845 ntBASIC18.39■□□□□ 0.54
CDK18Q07002 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDK18Q07002 AC138932.1-201ENST00000534164 6830 ntBASIC18.39■□□□□ 0.54
CDK18Q07002 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK18Q07002 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK18Q07002 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CDK18Q07002 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CDK18Q07002 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK18Q07002 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK18Q07002 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.39■□□□□ 0.53
CDK18Q07002 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
CDK18Q07002 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDK18Q07002 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK18Q07002 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.39■□□□□ 0.53
CDK18Q07002 HLA-F-220ENST00000434407 884 ntBASIC18.39■□□□□ 0.53
CDK18Q07002 AC112907.2-201ENST00000448639 330 ntBASIC18.39■□□□□ 0.53
CDK18Q07002 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK18Q07002 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CDK18Q07002 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK18Q07002 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK18Q07002 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK18Q07002 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CDK18Q07002 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK18Q07002 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK18Q07002 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK18Q07002 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.39■□□□□ 0.53
CDK18Q07002 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK18Q07002 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK18Q07002 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK18Q07002 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK18Q07002 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK18Q07002 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK18Q07002 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK18Q07002 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK18Q07002 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
CDK18Q07002 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK18Q07002 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
CDK18Q07002 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK18Q07002 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CDK18Q07002 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDK18Q07002 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDK18Q07002 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK18Q07002 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms