Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.29■□□□□ 0.68
CDH8P55286 AC068472.1-201ENST00000474589 881 ntBASIC19.29■□□□□ 0.68
CDH8P55286 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.29■□□□□ 0.68
CDH8P55286 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDH8P55286 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.29■□□□□ 0.68
CDH8P55286 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDH8P55286 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.29■□□□□ 0.68
CDH8P55286 MIR3180-1-201ENST00000580374 94 ntBASIC19.29■□□□□ 0.68
CDH8P55286 MIR3180-3-201ENST00000584616 94 ntBASIC19.29■□□□□ 0.68
CDH8P55286 AP002414.4-201ENST00000589764 1148 ntBASIC19.29■□□□□ 0.68
CDH8P55286 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.29■□□□□ 0.68
CDH8P55286 AL592071.1-201ENST00000611956 408 ntBASIC19.29■□□□□ 0.68
CDH8P55286 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.29■□□□□ 0.68
CDH8P55286 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.29■□□□□ 0.68
CDH8P55286 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH8P55286 AL390961.4-201ENST00000623958 2535 ntBASIC19.29■□□□□ 0.68
CDH8P55286 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH8P55286 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH8P55286 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH8P55286 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.29■□□□□ 0.68
CDH8P55286 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
CDH8P55286 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH8P55286 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDH8P55286 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDH8P55286 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH8P55286 KRT18P1-202ENST00000452408 1331 ntBASIC19.28■□□□□ 0.68
CDH8P55286 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH8P55286 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH8P55286 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH8P55286 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH8P55286 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH8P55286 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH8P55286 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH8P55286 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH8P55286 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDH8P55286 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CDH8P55286 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH8P55286 GUSBP12-201ENST00000513727 720 ntBASIC19.28■□□□□ 0.68
CDH8P55286 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.28■□□□□ 0.68
CDH8P55286 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.28■□□□□ 0.68
CDH8P55286 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.28■□□□□ 0.68
CDH8P55286 AC090616.6-201ENST00000582640 721 ntBASIC19.28■□□□□ 0.68
CDH8P55286 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CDH8P55286 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH8P55286 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.28■□□□□ 0.68
CDH8P55286 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH8P55286 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
CDH8P55286 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH8P55286 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDH8P55286 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.27■□□□□ 0.68
CDH8P55286 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH8P55286 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDH8P55286 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH8P55286 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH8P55286 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH8P55286 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH8P55286 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH8P55286 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH8P55286 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH8P55286 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH8P55286 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CDH8P55286 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDH8P55286 AL845331.1-201ENST00000424978 1190 ntBASIC19.27■□□□□ 0.68
CDH8P55286 ATP5G2P1-201ENST00000433580 426 ntBASIC19.27■□□□□ 0.68
CDH8P55286 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDH8P55286 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
CDH8P55286 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CDH8P55286 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.27■□□□□ 0.68
CDH8P55286 AC009154.2-201ENST00000621177 724 ntBASIC19.27■□□□□ 0.68
CDH8P55286 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDH8P55286 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDH8P55286 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CDH8P55286 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CDH8P55286 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CDH8P55286 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.27■□□□□ 0.67
CDH8P55286 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.27■□□□□ 0.67
CDH8P55286 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.27■□□□□ 0.67
CDH8P55286 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDH8P55286 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH8P55286 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.27■□□□□ 0.67
CDH8P55286 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH8P55286 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH8P55286 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH8P55286 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.27■□□□□ 0.67
CDH8P55286 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDH8P55286 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH8P55286 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH8P55286 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH8P55286 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH8P55286 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH8P55286 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH8P55286 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH8P55286 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH8P55286 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH8P55286 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CDH8P55286 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH8P55286 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH8P55286 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH8P55286 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH8P55286 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms