Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TUBP50607 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.05■□□□□ 0.64
TUBP50607 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TUBP50607 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TUBP50607 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TUBP50607 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.04■□□□□ 0.64
TUBP50607 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TUBP50607 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
TUBP50607 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TUBP50607 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TUBP50607 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TUBP50607 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TUBP50607 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TUBP50607 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TUBP50607 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TUBP50607 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.04■□□□□ 0.64
TUBP50607 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.04■□□□□ 0.64
TUBP50607 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
TUBP50607 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TUBP50607 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.04■□□□□ 0.64
TUBP50607 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
TUBP50607 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TUBP50607 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TUBP50607 AL024508.2-201ENST00000607749 1894 ntBASIC19.04■□□□□ 0.64
TUBP50607 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TUBP50607 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TUBP50607 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
TUBP50607 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TUBP50607 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TUBP50607 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TUBP50607 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.03■□□□□ 0.64
TUBP50607 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TUBP50607 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TUBP50607 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TUBP50607 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TUBP50607 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TUBP50607 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TUBP50607 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.03■□□□□ 0.64
TUBP50607 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TUBP50607 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.03■□□□□ 0.64
TUBP50607 RN7SL606P-201ENST00000472779 293 ntBASIC19.03■□□□□ 0.64
TUBP50607 GUSBP12-201ENST00000513727 720 ntBASIC19.03■□□□□ 0.64
TUBP50607 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TUBP50607 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.03■□□□□ 0.64
TUBP50607 IGHV3-41-201ENST00000613121 348 ntBASIC19.03■□□□□ 0.64
TUBP50607 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.03■□□□□ 0.64
TUBP50607 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
TUBP50607 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TUBP50607 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.03■□□□□ 0.64
TUBP50607 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.03■□□□□ 0.64
TUBP50607 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TUBP50607 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TUBP50607 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TUBP50607 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TUBP50607 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TUBP50607 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.02■□□□□ 0.64
TUBP50607 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TUBP50607 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.02■□□□□ 0.64
TUBP50607 AC099398.1-201ENST00000567919 2776 ntBASIC19.02■□□□□ 0.64
TUBP50607 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TUBP50607 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TUBP50607 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TUBP50607 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TUBP50607 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TUBP50607 NUS1P1-201ENST00000446295 882 ntBASIC19.02■□□□□ 0.64
TUBP50607 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.02■□□□□ 0.64
TUBP50607 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.02■□□□□ 0.64
TUBP50607 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.02■□□□□ 0.64
TUBP50607 AL592071.1-201ENST00000611956 408 ntBASIC19.02■□□□□ 0.64
TUBP50607 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.02■□□□□ 0.64
TUBP50607 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TUBP50607 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TUBP50607 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.02■□□□□ 0.64
TUBP50607 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TUBP50607 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TUBP50607 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TUBP50607 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.63
TUBP50607 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
TUBP50607 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
TUBP50607 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.02■□□□□ 0.63
TUBP50607 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TUBP50607 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
TUBP50607 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.01■□□□□ 0.63
TUBP50607 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.01■□□□□ 0.63
TUBP50607 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TUBP50607 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TUBP50607 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TUBP50607 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TUBP50607 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TUBP50607 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TUBP50607 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TUBP50607 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TUBP50607 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.01■□□□□ 0.63
TUBP50607 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
TUBP50607 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TUBP50607 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TUBP50607 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TUBP50607 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TUBP50607 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TUBP50607 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms