Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 AC010947.1-201ENST00000623454 693 ntBASIC17.57■□□□□ 0.4
KRT6CP48668 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.57■□□□□ 0.4
KRT6CP48668 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
KRT6CP48668 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
KRT6CP48668 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6CP48668 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
KRT6CP48668 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6CP48668 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6CP48668 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.57■□□□□ 0.4
KRT6CP48668 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT6CP48668 AL024508.2-201ENST00000607749 1894 ntBASIC17.56■□□□□ 0.4
KRT6CP48668 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.56■□□□□ 0.4
KRT6CP48668 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT6CP48668 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.56■□□□□ 0.4
KRT6CP48668 INGX-201ENST00000359239 846 ntBASIC17.56■□□□□ 0.4
KRT6CP48668 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
KRT6CP48668 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
KRT6CP48668 AC009947.2-201ENST00000444014 672 ntBASIC17.56■□□□□ 0.4
KRT6CP48668 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
KRT6CP48668 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT6CP48668 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
KRT6CP48668 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.56■□□□□ 0.4
KRT6CP48668 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT6CP48668 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
KRT6CP48668 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
KRT6CP48668 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.56■□□□□ 0.4
KRT6CP48668 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6CP48668 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6CP48668 KRT8P9-201ENST00000558927 1449 ntBASIC17.55■□□□□ 0.4
KRT6CP48668 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6CP48668 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
KRT6CP48668 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6CP48668 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6CP48668 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6CP48668 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6CP48668 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT6CP48668 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT6CP48668 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6CP48668 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6CP48668 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6CP48668 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6CP48668 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
KRT6CP48668 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT6CP48668 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
KRT6CP48668 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
KRT6CP48668 HMGA1P5-201ENST00000412453 271 ntBASIC17.55■□□□□ 0.4
KRT6CP48668 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6CP48668 TSPY15P-201ENST00000457163 923 ntBASIC17.55■□□□□ 0.4
KRT6CP48668 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.55■□□□□ 0.4
KRT6CP48668 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT6CP48668 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6CP48668 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
KRT6CP48668 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6CP48668 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
KRT6CP48668 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT6CP48668 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6CP48668 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT6CP48668 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
KRT6CP48668 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT6CP48668 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6CP48668 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT6CP48668 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT6CP48668 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
KRT6CP48668 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
KRT6CP48668 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT6CP48668 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
KRT6CP48668 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT6CP48668 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6CP48668 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.54■□□□□ 0.4
KRT6CP48668 SEC1P-202ENST00000473944 940 ntBASIC17.54■□□□□ 0.4
KRT6CP48668 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT6CP48668 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms