Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.2■□□□□ 0.66
BRCC3P46736 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRCC3P46736 BX323043.1-201ENST00000641006 1765 ntBASIC19.2■□□□□ 0.66
BRCC3P46736 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRCC3P46736 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.2■□□□□ 0.66
BRCC3P46736 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRCC3P46736 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.2■□□□□ 0.66
BRCC3P46736 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.2■□□□□ 0.66
BRCC3P46736 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.2■□□□□ 0.66
BRCC3P46736 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.2■□□□□ 0.66
BRCC3P46736 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRCC3P46736 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.2■□□□□ 0.66
BRCC3P46736 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRCC3P46736 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRCC3P46736 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.2■□□□□ 0.66
BRCC3P46736 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.2■□□□□ 0.66
BRCC3P46736 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRCC3P46736 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
BRCC3P46736 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRCC3P46736 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
BRCC3P46736 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.2■□□□□ 0.66
BRCC3P46736 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BRCC3P46736 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BRCC3P46736 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
BRCC3P46736 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRCC3P46736 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
BRCC3P46736 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCC3P46736 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCC3P46736 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCC3P46736 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRCC3P46736 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCC3P46736 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.19■□□□□ 0.66
BRCC3P46736 AC093010.1-201ENST00000473625 1624 ntBASIC19.19■□□□□ 0.66
BRCC3P46736 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRCC3P46736 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRCC3P46736 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCC3P46736 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCC3P46736 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BRCC3P46736 AC079776.4-201ENST00000511039 504 ntBASIC19.19■□□□□ 0.66
BRCC3P46736 AC106795.1-205ENST00000512851 1056 ntBASIC19.19■□□□□ 0.66
BRCC3P46736 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
BRCC3P46736 AC011467.2-201ENST00000598425 242 ntBASIC19.19■□□□□ 0.66
BRCC3P46736 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.19■□□□□ 0.66
BRCC3P46736 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
BRCC3P46736 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCC3P46736 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.19■□□□□ 0.66
BRCC3P46736 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCC3P46736 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCC3P46736 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.19■□□□□ 0.66
BRCC3P46736 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
BRCC3P46736 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
BRCC3P46736 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.19■□□□□ 0.66
BRCC3P46736 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BRCC3P46736 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.19■□□□□ 0.66
BRCC3P46736 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
BRCC3P46736 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
BRCC3P46736 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRCC3P46736 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.18■□□□□ 0.66
BRCC3P46736 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.18■□□□□ 0.66
BRCC3P46736 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
BRCC3P46736 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.18■□□□□ 0.66
BRCC3P46736 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
BRCC3P46736 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRCC3P46736 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.18■□□□□ 0.66
BRCC3P46736 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
BRCC3P46736 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
BRCC3P46736 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.18■□□□□ 0.66
BRCC3P46736 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRCC3P46736 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.18■□□□□ 0.66
BRCC3P46736 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.18■□□□□ 0.66
BRCC3P46736 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
BRCC3P46736 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRCC3P46736 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRCC3P46736 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.18■□□□□ 0.66
BRCC3P46736 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.18■□□□□ 0.66
BRCC3P46736 AC008608.2-201ENST00000606089 416 ntBASIC19.18■□□□□ 0.66
BRCC3P46736 AP001269.4-201ENST00000609611 512 ntBASIC19.18■□□□□ 0.66
BRCC3P46736 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRCC3P46736 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRCC3P46736 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRCC3P46736 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BRCC3P46736 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
BRCC3P46736 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRCC3P46736 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.18■□□□□ 0.66
BRCC3P46736 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.18■□□□□ 0.66
BRCC3P46736 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BRCC3P46736 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.18■□□□□ 0.66
BRCC3P46736 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRCC3P46736 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRCC3P46736 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRCC3P46736 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRCC3P46736 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.17■□□□□ 0.66
BRCC3P46736 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.17■□□□□ 0.66
BRCC3P46736 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BRCC3P46736 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRCC3P46736 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BRCC3P46736 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
BRCC3P46736 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.17■□□□□ 0.66
BRCC3P46736 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.17■□□□□ 0.66
BRCC3P46736 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms