Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC26.94■■□□□ 1.9
KDM5CP41229 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
KDM5CP41229 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
KDM5CP41229 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
KDM5CP41229 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC26.93■■□□□ 1.9
KDM5CP41229 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
KDM5CP41229 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
KDM5CP41229 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
KDM5CP41229 SNCG-201ENST00000348795 684 ntTSL 2 BASIC26.93■■□□□ 1.9
KDM5CP41229 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC26.93■■□□□ 1.9
KDM5CP41229 ARTN-206ENST00000472435 402 ntTSL 3 BASIC26.93■■□□□ 1.9
KDM5CP41229 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC26.93■■□□□ 1.9
KDM5CP41229 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC26.93■■□□□ 1.9
KDM5CP41229 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC26.93■■□□□ 1.9
KDM5CP41229 AP002472.1-201ENST00000577490 586 ntBASIC26.93■■□□□ 1.9
KDM5CP41229 AL589182.2-201ENST00000619332 1049 ntBASIC26.93■■□□□ 1.9
KDM5CP41229 AC004706.3-202ENST00000621574 984 ntBASIC26.93■■□□□ 1.9
KDM5CP41229 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
KDM5CP41229 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
KDM5CP41229 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
KDM5CP41229 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
KDM5CP41229 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC26.93■■□□□ 1.9
KDM5CP41229 MED29-202ENST00000594368 1471 ntTSL 2 BASIC26.93■■□□□ 1.9
KDM5CP41229 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC26.93■■□□□ 1.9
KDM5CP41229 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
KDM5CP41229 AL161938.1-201ENST00000569833 2180 ntBASIC26.93■■□□□ 1.9
KDM5CP41229 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
KDM5CP41229 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC26.92■■□□□ 1.9
KDM5CP41229 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC26.92■■□□□ 1.9
KDM5CP41229 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC26.92■■□□□ 1.9
KDM5CP41229 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
KDM5CP41229 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC26.92■■□□□ 1.9
KDM5CP41229 RIN3-211ENST00000557762 517 ntTSL 3 BASIC26.92■■□□□ 1.9
KDM5CP41229 SNHG9-202ENST00000564014 471 ntBASIC26.92■■□□□ 1.9
KDM5CP41229 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
KDM5CP41229 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
KDM5CP41229 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
KDM5CP41229 AC148477.5-201ENST00000625164 1645 ntBASIC26.92■■□□□ 1.9
KDM5CP41229 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
KDM5CP41229 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
KDM5CP41229 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC26.92■■□□□ 1.9
KDM5CP41229 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC26.92■■□□□ 1.9
KDM5CP41229 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
KDM5CP41229 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
KDM5CP41229 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
KDM5CP41229 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC26.92■■□□□ 1.9
KDM5CP41229 GPR89P-201ENST00000407924 1495 ntBASIC26.92■■□□□ 1.9
KDM5CP41229 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
KDM5CP41229 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
KDM5CP41229 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC26.92■■□□□ 1.9
KDM5CP41229 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
KDM5CP41229 SLC4A1APP2-201ENST00000424054 1259 ntBASIC26.92■■□□□ 1.9
KDM5CP41229 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
KDM5CP41229 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
KDM5CP41229 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
KDM5CP41229 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
KDM5CP41229 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC26.91■■□□□ 1.9
KDM5CP41229 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
KDM5CP41229 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
KDM5CP41229 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC26.91■■□□□ 1.9
KDM5CP41229 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC26.91■■□□□ 1.9
KDM5CP41229 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC26.91■■□□□ 1.9
KDM5CP41229 PDPK2P-202ENST00000562415 1191 ntBASIC26.91■■□□□ 1.9
KDM5CP41229 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
KDM5CP41229 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC26.91■■□□□ 1.9
KDM5CP41229 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC26.91■■□□□ 1.9
KDM5CP41229 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
KDM5CP41229 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC26.9■■□□□ 1.9
KDM5CP41229 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC26.9■■□□□ 1.9
KDM5CP41229 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC26.9■■□□□ 1.9
KDM5CP41229 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
KDM5CP41229 AC006504.4-201ENST00000592118 1568 ntBASIC26.9■■□□□ 1.9
KDM5CP41229 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
KDM5CP41229 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
KDM5CP41229 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
KDM5CP41229 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
KDM5CP41229 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
KDM5CP41229 AP000344.2-201ENST00000512987 629 ntBASIC26.9■■□□□ 1.9
KDM5CP41229 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
KDM5CP41229 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
KDM5CP41229 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC26.9■■□□□ 1.9
KDM5CP41229 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC26.9■■□□□ 1.9
KDM5CP41229 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
KDM5CP41229 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
KDM5CP41229 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
KDM5CP41229 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
KDM5CP41229 AC004817.3-201ENST00000602957 2129 ntBASIC26.89■■□□□ 1.9
KDM5CP41229 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
KDM5CP41229 AL499627.1-201ENST00000569373 2188 ntBASIC26.89■■□□□ 1.9
KDM5CP41229 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
KDM5CP41229 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
KDM5CP41229 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC26.89■■□□□ 1.9
KDM5CP41229 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC26.89■■□□□ 1.9
KDM5CP41229 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC26.89■■□□□ 1.9
KDM5CP41229 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC26.89■■□□□ 1.9
KDM5CP41229 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
KDM5CP41229 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC26.89■■□□□ 1.9
KDM5CP41229 MIR4751-201ENST00000578027 74 ntBASIC26.89■■□□□ 1.9
KDM5CP41229 AC008667.4-201ENST00000607370 168 ntBASIC26.89■■□□□ 1.9
KDM5CP41229 AC010507.1-201ENST00000633895 436 ntBASIC26.89■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms