Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.02■□□□□ 0.47
HMGCLP35914 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HMGCLP35914 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HMGCLP35914 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
HMGCLP35914 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HMGCLP35914 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLP35914 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGCLP35914 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLP35914 AC022898.2-201ENST00000616822 1312 ntBASIC18.01■□□□□ 0.47
HMGCLP35914 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
HMGCLP35914 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLP35914 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLP35914 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLP35914 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HMGCLP35914 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
HMGCLP35914 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLP35914 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLP35914 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGCLP35914 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLP35914 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.01■□□□□ 0.47
HMGCLP35914 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.01■□□□□ 0.47
HMGCLP35914 AL358472.4-201ENST00000633140 710 ntBASIC18.01■□□□□ 0.47
HMGCLP35914 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.01■□□□□ 0.47
HMGCLP35914 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLP35914 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLP35914 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HMGCLP35914 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HMGCLP35914 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.01■□□□□ 0.47
HMGCLP35914 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.01■□□□□ 0.47
HMGCLP35914 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLP35914 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HMGCLP35914 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLP35914 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLP35914 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLP35914 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HMGCLP35914 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HMGCLP35914 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCLP35914 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCLP35914 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18■□□□□ 0.47
HMGCLP35914 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18■□□□□ 0.47
HMGCLP35914 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
HMGCLP35914 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
HMGCLP35914 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18■□□□□ 0.47
HMGCLP35914 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18■□□□□ 0.47
HMGCLP35914 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
HMGCLP35914 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCLP35914 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCLP35914 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18■□□□□ 0.47
HMGCLP35914 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18■□□□□ 0.47
HMGCLP35914 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18■□□□□ 0.47
HMGCLP35914 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18■□□□□ 0.47
HMGCLP35914 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18■□□□□ 0.47
HMGCLP35914 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18■□□□□ 0.47
HMGCLP35914 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HMGCLP35914 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18■□□□□ 0.47
HMGCLP35914 AL121672.3-201ENST00000608644 468 ntBASIC18■□□□□ 0.47
HMGCLP35914 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18■□□□□ 0.47
HMGCLP35914 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18■□□□□ 0.47
HMGCLP35914 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCLP35914 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HMGCLP35914 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18■□□□□ 0.47
HMGCLP35914 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HMGCLP35914 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18■□□□□ 0.47
HMGCLP35914 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18■□□□□ 0.47
HMGCLP35914 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLP35914 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLP35914 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLP35914 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HMGCLP35914 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HMGCLP35914 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
HMGCLP35914 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
HMGCLP35914 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HMGCLP35914 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLP35914 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLP35914 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLP35914 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.99■□□□□ 0.47
HMGCLP35914 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLP35914 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.99■□□□□ 0.47
HMGCLP35914 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.99■□□□□ 0.47
HMGCLP35914 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
HMGCLP35914 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLP35914 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.99■□□□□ 0.47
HMGCLP35914 SLC25A6P5-201ENST00000435663 894 ntBASIC17.99■□□□□ 0.47
HMGCLP35914 BX276092.5-203ENST00000456199 560 ntBASIC17.99■□□□□ 0.47
HMGCLP35914 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.99■□□□□ 0.47
HMGCLP35914 AC068472.1-201ENST00000474589 881 ntBASIC17.99■□□□□ 0.47
HMGCLP35914 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLP35914 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.99■□□□□ 0.47
HMGCLP35914 GUSBP12-201ENST00000513727 720 ntBASIC17.99■□□□□ 0.47
HMGCLP35914 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.99■□□□□ 0.47
HMGCLP35914 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.99■□□□□ 0.47
HMGCLP35914 AC090616.6-201ENST00000582640 721 ntBASIC17.99■□□□□ 0.47
HMGCLP35914 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.99■□□□□ 0.47
HMGCLP35914 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLP35914 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.99■□□□□ 0.47
HMGCLP35914 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLP35914 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.99■□□□□ 0.47
HMGCLP35914 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HMGCLP35914 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HMGCLP35914 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms