Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
APOA4P06727 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
APOA4P06727 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.17■□□□□ 0.5
APOA4P06727 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.17■□□□□ 0.5
APOA4P06727 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.17■□□□□ 0.5
APOA4P06727 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.17■□□□□ 0.5
APOA4P06727 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.17■□□□□ 0.5
APOA4P06727 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
APOA4P06727 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
APOA4P06727 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.17■□□□□ 0.5
APOA4P06727 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
APOA4P06727 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
APOA4P06727 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
APOA4P06727 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
APOA4P06727 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
APOA4P06727 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.16■□□□□ 0.5
APOA4P06727 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.16■□□□□ 0.5
APOA4P06727 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.16■□□□□ 0.5
APOA4P06727 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
APOA4P06727 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.16■□□□□ 0.5
APOA4P06727 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.16■□□□□ 0.5
APOA4P06727 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 AC024243.1-201ENST00000609234 778 ntBASIC18.16■□□□□ 0.5
APOA4P06727 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
APOA4P06727 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
APOA4P06727 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
APOA4P06727 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.16■□□□□ 0.5
APOA4P06727 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.16■□□□□ 0.5
APOA4P06727 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.16■□□□□ 0.5
APOA4P06727 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.16■□□□□ 0.5
APOA4P06727 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
APOA4P06727 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.16■□□□□ 0.5
APOA4P06727 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
APOA4P06727 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
APOA4P06727 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.15■□□□□ 0.5
APOA4P06727 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.15■□□□□ 0.5
APOA4P06727 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
APOA4P06727 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOA4P06727 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APOA4P06727 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOA4P06727 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.15■□□□□ 0.5
APOA4P06727 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.15■□□□□ 0.5
APOA4P06727 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOA4P06727 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOA4P06727 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
APOA4P06727 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
APOA4P06727 AC005521.1-201ENST00000393351 872 ntBASIC18.15■□□□□ 0.5
APOA4P06727 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.15■□□□□ 0.5
APOA4P06727 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.15■□□□□ 0.5
APOA4P06727 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.15■□□□□ 0.5
APOA4P06727 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.15■□□□□ 0.5
APOA4P06727 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.15■□□□□ 0.5
APOA4P06727 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.15■□□□□ 0.5
APOA4P06727 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.15■□□□□ 0.5
APOA4P06727 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.15■□□□□ 0.5
APOA4P06727 MIR3180-4-201ENST00000582223 153 ntBASIC18.15■□□□□ 0.5
APOA4P06727 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.15■□□□□ 0.5
APOA4P06727 AC140113.3-201ENST00000605663 199 ntBASIC18.15■□□□□ 0.5
APOA4P06727 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOA4P06727 AL031432.5-201ENST00000641059 760 ntBASIC18.15■□□□□ 0.5
APOA4P06727 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.15■□□□□ 0.5
APOA4P06727 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOA4P06727 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOA4P06727 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APOA4P06727 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOA4P06727 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.15■□□□□ 0.5
APOA4P06727 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.15■□□□□ 0.5
APOA4P06727 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.15■□□□□ 0.5
APOA4P06727 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APOA4P06727 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOA4P06727 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APOA4P06727 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
APOA4P06727 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
APOA4P06727 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
APOA4P06727 PHGDH-209ENST00000641074 1780 ntBASIC18.14■□□□□ 0.5
APOA4P06727 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
APOA4P06727 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APOA4P06727 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
APOA4P06727 AL163051.1-201ENST00000569214 1512 ntBASIC18.14■□□□□ 0.49
APOA4P06727 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
APOA4P06727 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
APOA4P06727 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms