Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
APOA1P02647 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
APOA1P02647 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.17■□□□□ 0.18
APOA1P02647 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
APOA1P02647 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.17■□□□□ 0.18
APOA1P02647 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
APOA1P02647 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.17■□□□□ 0.18
APOA1P02647 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
APOA1P02647 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
APOA1P02647 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APOA1P02647 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
APOA1P02647 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
APOA1P02647 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APOA1P02647 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APOA1P02647 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
APOA1P02647 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA1P02647 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.16■□□□□ 0.18
APOA1P02647 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA1P02647 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
APOA1P02647 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.16■□□□□ 0.18
APOA1P02647 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.16■□□□□ 0.18
APOA1P02647 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA1P02647 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.16■□□□□ 0.18
APOA1P02647 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APOA1P02647 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.16■□□□□ 0.18
APOA1P02647 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
APOA1P02647 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
APOA1P02647 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.16■□□□□ 0.18
APOA1P02647 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.16■□□□□ 0.18
APOA1P02647 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.16■□□□□ 0.18
APOA1P02647 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
APOA1P02647 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA1P02647 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA1P02647 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA1P02647 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.16■□□□□ 0.18
APOA1P02647 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.16■□□□□ 0.18
APOA1P02647 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA1P02647 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
APOA1P02647 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA1P02647 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA1P02647 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
APOA1P02647 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.16■□□□□ 0.18
APOA1P02647 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.15■□□□□ 0.18
APOA1P02647 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
APOA1P02647 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA1P02647 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
APOA1P02647 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APOA1P02647 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA1P02647 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA1P02647 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APOA1P02647 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.15■□□□□ 0.18
APOA1P02647 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
APOA1P02647 RCC2P6-201ENST00000526625 1557 ntBASIC16.15■□□□□ 0.18
APOA1P02647 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.15■□□□□ 0.18
APOA1P02647 AC112777.1-201ENST00000540175 1423 ntBASIC16.15■□□□□ 0.18
APOA1P02647 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.15■□□□□ 0.18
APOA1P02647 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.15■□□□□ 0.18
APOA1P02647 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA1P02647 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA1P02647 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APOA1P02647 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA1P02647 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APOA1P02647 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
APOA1P02647 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA1P02647 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.15■□□□□ 0.18
APOA1P02647 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
APOA1P02647 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA1P02647 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
APOA1P02647 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
APOA1P02647 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.15■□□□□ 0.18
APOA1P02647 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
APOA1P02647 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
APOA1P02647 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
APOA1P02647 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.14■□□□□ 0.18
APOA1P02647 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
APOA1P02647 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
APOA1P02647 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APOA1P02647 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
APOA1P02647 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
APOA1P02647 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
APOA1P02647 AL365209.1-201ENST00000624418 6473 ntBASIC16.14■□□□□ 0.17
APOA1P02647 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
APOA1P02647 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APOA1P02647 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
APOA1P02647 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APOA1P02647 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.14■□□□□ 0.17
APOA1P02647 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
APOA1P02647 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
APOA1P02647 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
APOA1P02647 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
APOA1P02647 LSM12P1-201ENST00000411836 588 ntBASIC16.14■□□□□ 0.17
APOA1P02647 AL512625.2-201ENST00000417533 625 ntBASIC16.14■□□□□ 0.17
APOA1P02647 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
APOA1P02647 TUBB8P6-201ENST00000436895 1288 ntBASIC16.14■□□□□ 0.17
APOA1P02647 TSPY23P-201ENST00000440136 739 ntBASIC16.14■□□□□ 0.17
APOA1P02647 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.14■□□□□ 0.17
APOA1P02647 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.14■□□□□ 0.17
APOA1P02647 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.14■□□□□ 0.17
APOA1P02647 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.14■□□□□ 0.17
APOA1P02647 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms