Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.56■□□□□ 0.4
KRT6AP02538 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT6AP02538 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6AP02538 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
KRT6AP02538 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6AP02538 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6AP02538 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6AP02538 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
KRT6AP02538 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6AP02538 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6AP02538 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.56■□□□□ 0.4
KRT6AP02538 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6AP02538 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6AP02538 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6AP02538 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT6AP02538 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6AP02538 KRT8P9-201ENST00000558927 1449 ntBASIC17.55■□□□□ 0.4
KRT6AP02538 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
KRT6AP02538 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6AP02538 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6AP02538 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6AP02538 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6AP02538 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT6AP02538 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT6AP02538 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6AP02538 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6AP02538 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6AP02538 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
KRT6AP02538 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT6AP02538 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
KRT6AP02538 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
KRT6AP02538 HMGA1P5-201ENST00000412453 271 ntBASIC17.55■□□□□ 0.4
KRT6AP02538 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6AP02538 TSPY15P-201ENST00000457163 923 ntBASIC17.55■□□□□ 0.4
KRT6AP02538 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.55■□□□□ 0.4
KRT6AP02538 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT6AP02538 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6AP02538 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
KRT6AP02538 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6AP02538 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
KRT6AP02538 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
KRT6AP02538 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6AP02538 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT6AP02538 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.55■□□□□ 0.4
KRT6AP02538 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT6AP02538 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT6AP02538 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
KRT6AP02538 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT6AP02538 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
KRT6AP02538 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
KRT6AP02538 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT6AP02538 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
KRT6AP02538 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT6AP02538 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.54■□□□□ 0.4
KRT6AP02538 SEC1P-202ENST00000473944 940 ntBASIC17.54■□□□□ 0.4
KRT6AP02538 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT6AP02538 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT6AP02538 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.54■□□□□ 0.4
KRT6AP02538 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT6AP02538 NEK4P2-201ENST00000580004 1012 ntBASIC17.54■□□□□ 0.4
KRT6AP02538 AC008687.5-201ENST00000593746 558 ntBASIC17.54■□□□□ 0.4
KRT6AP02538 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.54■□□□□ 0.4
KRT6AP02538 AC024243.1-201ENST00000609234 778 ntBASIC17.54■□□□□ 0.4
KRT6AP02538 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT6AP02538 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
KRT6AP02538 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT6AP02538 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT6AP02538 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT6AP02538 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT6AP02538 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT6AP02538 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
KRT6AP02538 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6AP02538 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT6AP02538 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6AP02538 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT6AP02538 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6AP02538 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KRT6AP02538 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
KRT6AP02538 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms